Factsheet for TraesCS3D01G342900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G349000.1	Wheat	mitochondrion, plastid	96.36	96.66
TraesCS3B01G381100.1	Wheat	mitochondrion, plastid	95.45	95.45
HORVU3Hr1G087940.4	Barley	cytosol, plastid	90.91	82.19
Os01t0829000-01	Rice	mitochondrion	76.36	79.5
GSMUA_Achr3P21650_001	Banana	cytosol	31.52	78.2
Zm00001d043009_P002	Maize	plastid	76.06	76.76
EES01697	Sorghum	plastid	74.55	75.46
VIT_07s0005g03800.t01	Wine grape	plastid	56.06	56.75
Bra010359.1-P	Field mustard	plastid	54.24	55.25
AT4G28590.1	Thale cress	plastid	54.24	54.08
PGSC0003DMT400036037	Potato	plastid	56.97	54.02
Solyc02g079730.2.1	Tomato	plastid	56.97	51.51
KRH42851	Soybean	mitochondrion	53.64	47.71
KRH58946	Soybean	plastid	53.64	47.45
TraesCS1D01G260200.1	Wheat	plastid	28.18	28.18

Protein Annotations

EnsemblPlants:TraesCS3D01G342900.1	EnsemblPlantsGene:TraesCS3D01G342900	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0042644	InterPro:Thioredoxin-like_sf
PANTHER:PTHR34669	PANTHER:PTHR34669:SF2	SEG:seg	SUPFAM:SSF52833	MapMan:35.1	:

Description

No Description!

Coordinates

chr3D:+:455594013..455595557

Molecular Weight (calculated)

37524.4 Da

IEP (calculated)

6.552

GRAVY (calculated)

-0.774

Length

330 amino acids

Sequence
(BLAST)

001: MLRLPALLPL KPSAPATGLN PTRRSHGHRG PKRLLASSAT PPPQPPPPAR RTPSPTTAPK PFKREPRAGP QNPEGATAEF PTTKPRKPRR GRRSEAAAVE
101: DFVRDRLEQV FASIQERDPE VLQGKGDILK PKEEEELASG EKPGEEDGEQ KTVVEEEDPS WPLDADVGWG VRASEYFDKH SIKNVTVDGV EIDWEGEVDR
201: GWVKEINCLE WESFAFHPSP LIVLVFERYN RAADNWRFLQ ELEKATKVYW DTKDRLPPRT VKIDLNIERD LAYALQAKEC PQLLFLRGNK ILYREKEIRT
301: ADELVQMIAY FYYNAKRPSC VNPEALAPSF

Best Arabidopsis Sequence Match ( AT4G28590.1 )
(BLAST)

001: MSFFAVACSA PRSSMLLTGL NSSFSDMHRS PLFVFPVTIS SRSVKRFAAV SSDSVLDPES KNQTRSRRKN KEAVTPIAET ENNEKFPTKV PRKSKRGRRS
101: EADAVEDYVR SSLERTFSTI KEQNPEVFEN KEKANFIKDR GVDEEEEEEE EMVVEEEDPD WPVDTDVGWG IKASEYFDTH PIKNVVGDDG SEIDWEGEID
201: DSWVKEINCL EWESFAFHPS PLVVLVFERY KRASDNWKTL KELEKAIKVY WDAKDRLPPR AVKIDLNIET DLAYALKAKE CPQILFLRGN RILYREKDFR
301: TADELVHMIA HFYYKAKRPS CVDKANVTPY C

Arabidopsis Description

MRL7FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily pr /.../(TAIR:AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species: Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). [Source:TAIR;Acc:AT4G28590]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.