Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024159.1-P | Field mustard | cytosol | 83.04 | 88.02 |
| KRH74183 | Soybean | cytosol | 73.04 | 77.06 |
| EER98621 | Sorghum | cytosol | 66.96 | 74.4 |
| Os09t0280600-01 | Rice | nucleus | 66.96 | 74.4 |
| GSMUA_Achr9P00140_001 | Banana | cytosol | 60.87 | 72.92 |
| TraesCS5A01G174300.1 | Wheat | cytosol | 65.22 | 72.46 |
| TraesCS5B01G171700.1 | Wheat | nucleus | 65.22 | 72.46 |
| TraesCS5D01G178900.1 | Wheat | cytosol | 65.22 | 72.46 |
| VIT_11s0016g02770.t01 | Wine grape | cytosol | 66.09 | 72.38 |
| Solyc12g008680.1.1 | Tomato | cytosol | 73.48 | 69.83 |
| CDY30231 | Canola | mitochondrion | 88.7 | 68.23 |
| PGSC0003DMT400000930 | Potato | cytosol, golgi, nucleus | 72.61 | 67.61 |
| CDX80742 | Canola | cytosol | 34.35 | 66.39 |
| CDY47782 | Canola | cytosol, golgi, mitochondrion, plastid | 88.7 | 60.9 |
| Zm00001d005140_P003 | Maize | golgi, mitochondrion, nucleus | 64.78 | 57.53 |
Protein Annotations
| MapMan:13.3.6.4.5.1 | EntrezGene:829038 | UniProt:A0A178V4Z3 | ProteinID:AEE85596.1 | ProteinID:AEE85597.1 | EMBL:AK117713 |
| EMBL:AM162278 | ArrayExpress:AT4G29170 | EnsemblPlantsGene:AT4G29170 | RefSeq:AT4G29170 | TAIR:AT4G29170 | RefSeq:AT4G29170-TAIR-G |
| EnsemblPlants:AT4G29170.1 | TAIR:AT4G29170.1 | Symbol:ATMND1 | EMBL:BT005435 | ProteinID:CAB43931.1 | ProteinID:CAB79675.1 |
| ncoils:Coil | EMBL:DQ248000 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003690 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006302 | GO:GO:0006310 |
| GO:GO:0006950 | GO:GO:0007049 | GO:GO:0007131 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009553 | GO:GO:0009555 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010212 | GO:GO:0016043 |
| GO:GO:0051321 | InterPro:Mnd1 | RefSeq:NP_001078469.1 | RefSeq:NP_194646.2 | ProteinID:OAP00484.1 | ProteinID:OAP00485.1 |
| PFAM:PF03962 | PIRSF:PIRSF026991 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | UniProt:Q8GYD2 | UniParc:UPI000000C654 |
Description
MND1Meiotic nuclear division protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q8GYD2]
Coordinates
chr4:+:14382836..14385465
Molecular Weight (calculated)
26404.1 Da
IEP (calculated)
4.892
GRAVY (calculated)
-0.727
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKKRGLSLE EKREKMLQIF YESQDFFLLK ELEKMGPKKG VISQSVKDVI QSLVDDDLVA KDKIGISIYF WSLPSCAGNQ LRSVRQKLES DLQGSNKRLA
101: ELVDQCEALK KGREESEERT EALTQLKDIE KKHKDLKNEM VQFADNDPAT LEAKRNAIEV AHQSANRWTD NIFTLRQWCS NNFPQAKEQL EHLYTEAGIT
201: EDFDYIELSS FPLSSSHEAD TAKQLVQDEA
101: ELVDQCEALK KGREESEERT EALTQLKDIE KKHKDLKNEM VQFADNDPAT LEAKRNAIEV AHQSANRWTD NIFTLRQWCS NNFPQAKEQL EHLYTEAGIT
201: EDFDYIELSS FPLSSSHEAD TAKQLVQDEA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.