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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • cytosol 1
  • mitochondrion 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:nucleus
Predotar:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82513 Canola plastid 76.43 73.36
PGSC0003DMT400017734 Potato cytosol, mitochondrion, plastid 31.18 72.57
OQU80943 Sorghum endoplasmic reticulum, extracellular, vacuole 49.05 66.84
CDX75734 Canola plastid 76.43 65.9
VIT_13s0064g01270.t01 Wine grape plastid 61.6 64.8
KRH43478 Soybean plastid 61.22 61.92
Solyc01g086900.2.1 Tomato plastid 55.89 56.98
HORVU7Hr1G050430.1 Barley extracellular 24.71 55.56
TraesCS7A01G245500.1 Wheat mitochondrion 52.47 54.76
TraesCS7D01G244100.1 Wheat mitochondrion 52.47 54.76
TraesCS7B01G146000.1 Wheat mitochondrion 52.09 54.37
GSMUA_Achr7P02040_001 Banana mitochondrion 55.89 51.94
Zm00001d031439_P001 Maize mitochondrion 54.75 50.0
Os08t0506500-00 Rice mitochondrion 40.3 43.44
HORVU7Hr1G050390.9 Barley plastid 25.86 26.67
Protein Annotations
Gene3D:3.40.1280.10MapMan:35.2EntrezGene:832746UniProt:A0A178UI04ProteinID:AED93618.2Symbol:AGL26
EMBL:AK226438EMBL:AK227520ArrayExpress:AT5G26880EnsemblPlantsGene:AT5G26880RefSeq:AT5G26880TAIR:AT5G26880
RefSeq:AT5G26880-TAIR-GEnsemblPlants:AT5G26880.1TAIR:AT5G26880.1InterPro:Alpha/beta_knot_MTasesEMBL:BT010906GO:GO:0001510
GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003824GO:GO:0005488GO:GO:0006139
GO:GO:0006396GO:GO:0006950GO:GO:0006995GO:GO:0007154GO:GO:0008150GO:GO:0008152
GO:GO:0008168GO:GO:0008173GO:GO:0009605GO:GO:0009987GO:GO:0009991GO:GO:0016740
GO:GO:0032259InterPro:IPR029026HAMAP:MF_01885RefSeq:NP_001318659.1ProteinID:OAO93260.1PFAM:PF00588
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
PANTHER:PTHR42971PANTHER:PTHR42971:SF2UniProt:Q6NPL4SUPFAM:SSF75217InterPro:SpoU_MeTrfaseUniParc:UPI0000196F02
InterPro:tRNA_cyt/urid_MeTfraseInterPro:tRNA_m1G_MTases_N::::
Description
AGL26AGL26 [Source:UniProtKB/TrEMBL;Acc:A0A178UI04]
Coordinates
chr5:-:9457691..9459221
Molecular Weight (calculated)
28765.4 Da
IEP (calculated)
8.010
GRAVY (calculated)
-0.167
Length
263 amino acids
Sequence
(BLAST)
001: MESCCRSVIA SRTFHLRSSG RLFPSLSLTH LKGKLSLSIN SFSSKIQSHA LRGVGIGESD KKNPLPRGAG EGVKEDARSK LLHVVLVSPQ IPGNTGCIAR
101: TCAASAVGLH LVGPLGFQVD DARVKRAGLD YWPFVVVKAH SSWAEFQEYF RLQEGEKRMI AFTKRGTRIH SDFSYRSGDY LLFGSETSGL PPEALSDCNH
201: EPYGGGTLRI PMVETYVRCL NLSVSVGIAL YEASRQLNYE QIECAPQGCV NGEEPLLTED IFA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.