Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400017734 | Potato | cytosol, mitochondrion, plastid | 43.01 | 73.45 |
| HORVU7Hr1G050430.1 | Barley | extracellular | 44.04 | 72.65 |
| TraesCS7A01G245500.1 | Wheat | mitochondrion | 81.35 | 62.3 |
| TraesCS7B01G146000.1 | Wheat | mitochondrion | 80.83 | 61.9 |
| TraesCS7D01G244100.1 | Wheat | mitochondrion | 80.83 | 61.9 |
| Zm00001d031439_P001 | Maize | mitochondrion | 86.53 | 57.99 |
| VIT_13s0064g01270.t01 | Wine grape | plastid | 70.47 | 54.4 |
| Solyc01g086900.2.1 | Tomato | plastid | 69.43 | 51.94 |
| Os08t0506500-00 | Rice | mitochondrion | 65.28 | 51.64 |
| KRH43478 | Soybean | plastid | 69.43 | 51.54 |
| GSMUA_Achr7P02040_001 | Banana | mitochondrion | 72.02 | 49.12 |
| AT5G26880.1 | Thale cress | plastid | 66.84 | 49.05 |
| CDX82513 | Canola | plastid | 64.77 | 45.62 |
| CDX75734 | Canola | plastid | 64.25 | 40.66 |
| HORVU7Hr1G050390.9 | Barley | plastid | 34.2 | 25.88 |
Protein Annotations
| Gene3D:3.40.1280.10 | MapMan:35.2 | UniProt:A0A1Z5RAZ2 | InterPro:Alpha/beta_knot_MTases | GO:GO:0001510 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006396 |
| GO:GO:0006950 | GO:GO:0006995 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0008173 | GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0016740 | InterPro:IPR029026 |
| HAMAP:MF_01885 | EnsemblPlants:OQU80943 | ProteinID:OQU80943 | ProteinID:OQU80943.1 | PFAM:PF00588 | PIRSF:PIRSF029256 |
| PANTHER:PTHR42971 | PANTHER:PTHR42971:SF2 | EnsemblPlantsGene:SORBI_3007G211100 | SUPFAM:SSF75217 | SignalP:SignalP-noTM | InterPro:SpoU_MeTrfase |
| UniParc:UPI000B8BA81E | SEG:seg | InterPro:tRNA_cyt/urid_MeTfrase | InterPro:tRNA_m1G_MTases_N | : | : |
Description
hypothetical protein
Coordinates
chr7:+:64018656..64020728
Molecular Weight (calculated)
21730.1 Da
IEP (calculated)
6.233
GRAVY (calculated)
-0.135
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLVHHILTL LLFCSVDNKR IPGNTGSIAR TCAASAVGLH LVGPLGYKVD DTKLKRAGLD YWPYVVVKIH DSWDHFFDYF MKQEGDKRLL AFTKRGTQIH
101: SDFSYRPGDW LVFGSETKGL PQQALEDCCR EGLGGGTLRI PMVETYVRCL NLSVSVGIAL YEAARQLNYE QLQYQPELPE EAQGLFPAED IYA
101: SDFSYRPGDW LVFGSETKGL PQQALEDCCR EGLGGGTLRI PMVETYVRCL NLSVSVGIAL YEAARQLNYE QLQYQPELPE EAQGLFPAED IYA
001: MESCCRSVIA SRTFHLRSSG RLFPSLSLTH LKGKLSLSIN SFSSKIQSHA LRGVGIGESD KKNPLPRGAG EGVKEDARSK LLHVVLVSPQ IPGNTGCIAR
101: TCAASAVGLH LVGPLGFQVD DARVKRAGLD YWPFVVVKAH SSWAEFQEYF RLQEGEKRMI AFTKRGTRIH SDFSYRSGDY LLFGSETSGL PPEALSDCNH
201: EPYGGGTLRI PMVETYVRCL NLSVSVGIAL YEASRQLNYE QIECAPQGCV NGEEPLLTED IFA
101: TCAASAVGLH LVGPLGFQVD DARVKRAGLD YWPFVVVKAH SSWAEFQEYF RLQEGEKRMI AFTKRGTRIH SDFSYRSGDY LLFGSETSGL PPEALSDCNH
201: EPYGGGTLRI PMVETYVRCL NLSVSVGIAL YEASRQLNYE QIECAPQGCV NGEEPLLTED IFA
Arabidopsis Description
AGL26AGL26 [Source:UniProtKB/TrEMBL;Acc:A0A178UI04]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.