Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400017734 | Potato | cytosol, mitochondrion, plastid | 56.41 | 58.41 |
OQU80943 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 72.65 | 44.04 |
Os08t0506500-00 | Rice | mitochondrion | 75.21 | 36.07 |
Zm00001d031439_P001 | Maize | mitochondrion | 71.79 | 29.17 |
VIT_13s0064g01270.t01 | Wine grape | plastid | 61.54 | 28.8 |
Solyc01g086900.2.1 | Tomato | plastid | 59.83 | 27.13 |
GSMUA_Achr7P02040_001 | Banana | mitochondrion | 64.1 | 26.5 |
KRH43478 | Soybean | plastid | 56.41 | 25.38 |
AT5G26880.1 | Thale cress | plastid | 55.56 | 24.71 |
CDX82513 | Canola | plastid | 54.7 | 23.36 |
CDX75734 | Canola | plastid | 51.28 | 19.67 |
HORVU7Hr1G050390.9 | Barley | plastid | 16.24 | 7.45 |
Protein Annotations
Gene3D:3.40.1280.10 | MapMan:35.2 | UniProt:A0A287WGA2 | InterPro:Alpha/beta_knot_MTases | GO:GO:0001510 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006396 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008173 | GO:GO:0009987 | GO:GO:0016740 |
EnsemblPlantsGene:HORVU7Hr1G050430 | EnsemblPlants:HORVU7Hr1G050430.1 | InterPro:IPR029026 | PFAM:PF00588 | PFscan:PS51257 | PANTHER:PTHR42971 |
PANTHER:PTHR42971:SF2 | SUPFAM:SSF75217 | SignalP:SignalP-noTM | InterPro:SpoU_MeTrfase | TMHMM:TMhelix | UniParc:UPI000B461D8B |
InterPro:tRNA_cyt/urid_MeTfrase | InterPro:tRNA_m1G_MTases_N | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:181183868..181186088
Molecular Weight (calculated)
12981.5 Da
IEP (calculated)
3.949
GRAVY (calculated)
0.091
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MCPRHTLSDY MIAFVLLTFL ACFVQDFSYK PGDWLVFGSE TKGLPESALE DCSGEAVGGG TIRIPMVETY VRCLNLSVSV GIALYEAARQ LNYEQLQYQP
101: DLPEEAQGLF PAEDIYG
101: DLPEEAQGLF PAEDIYG
001: MESCCRSVIA SRTFHLRSSG RLFPSLSLTH LKGKLSLSIN SFSSKIQSHA LRGVGIGESD KKNPLPRGAG EGVKEDARSK LLHVVLVSPQ IPGNTGCIAR
101: TCAASAVGLH LVGPLGFQVD DARVKRAGLD YWPFVVVKAH SSWAEFQEYF RLQEGEKRMI AFTKRGTRIH SDFSYRSGDY LLFGSETSGL PPEALSDCNH
201: EPYGGGTLRI PMVETYVRCL NLSVSVGIAL YEASRQLNYE QIECAPQGCV NGEEPLLTED IFA
101: TCAASAVGLH LVGPLGFQVD DARVKRAGLD YWPFVVVKAH SSWAEFQEYF RLQEGEKRMI AFTKRGTRIH SDFSYRSGDY LLFGSETSGL PPEALSDCNH
201: EPYGGGTLRI PMVETYVRCL NLSVSVGIAL YEASRQLNYE QIECAPQGCV NGEEPLLTED IFA
Arabidopsis Description
AGL26AGL26 [Source:UniProtKB/TrEMBL;Acc:A0A178UI04]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.