Factsheet for GSMUA_Achr7P02040_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017734	Potato	cytosol, mitochondrion, plastid	29.68	74.34
OQU80943	Sorghum	endoplasmic reticulum, extracellular, vacuole	49.12	72.02
VIT_13s0064g01270.t01	Wine grape	plastid	57.95	65.6
HORVU7Hr1G050430.1	Barley	extracellular	26.5	64.1
Solyc01g086900.2.1	Tomato	plastid	57.6	63.18
TraesCS7A01G245500.1	Wheat	mitochondrion	54.06	60.71
TraesCS7D01G244100.1	Wheat	mitochondrion	54.06	60.71
TraesCS7B01G146000.1	Wheat	mitochondrion	53.71	60.32
KRH43478	Soybean	plastid	52.65	57.31
AT5G26880.1	Thale cress	plastid	51.94	55.89
CDX82513	Canola	plastid	52.3	54.01
Zm00001d031439_P001	Maize	mitochondrion	53.36	52.43
Os08t0506500-00	Rice	mitochondrion	42.76	49.59
CDX75734	Canola	plastid	51.94	48.2
HORVU7Hr1G050390.9	Barley	plastid	25.8	28.63

Protein Annotations

Gene3D:3.40.1280.10	MapMan:35.2	InterPro:Alpha/beta_knot_MTases	GO:GO:0001510	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006396	GO:GO:0006950
GO:GO:0006995	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008173
GO:GO:0009605	GO:GO:0009987	GO:GO:0009991	GO:GO:0016740	EnsemblPlantsGene:GSMUA_Achr7G02040_001	EnsemblPlants:GSMUA_Achr7P02040_001
EnsemblPlants:GSMUA_Achr7T02040_001	InterPro:IPR029026	UniProt:M0TDZ4	HAMAP:MF_01885	PFAM:PF00588	PANTHER:PTHR42971
PANTHER:PTHR42971:SF2	SUPFAM:SSF75217	InterPro:SpoU_MeTrfase	UniParc:UPI0002968C9B	SEG:seg	InterPro:tRNA_cyt/urid_MeTfrase
InterPro:tRNA_m1G_MTases_N	:	:	:	:	:

Description

Uncharacterized tRNA/rRNA methyltransferase slr0992 [Source:GMGC_GENE;Acc:GSMUA_Achr7G02040_001]

Coordinates

chr7:+:1572672..1576108

Molecular Weight (calculated)

31310.4 Da

IEP (calculated)

8.320

GRAVY (calculated)

-0.215

Length

283 amino acids

Sequence
(BLAST)

001: MGVGGVRTLH LRCSPVFLRP PPTRSPRLLC KLFSPPRTLQ KRHSLSFHSA ASPDPLSYSG MHPLEPSTYT HRSALCLENG NANSCTRCTH GVVNDISCNK
101: LLQVVLVSPQ IPGNTGSIAR TCAASAVGLH LVGPLGYTIE DSKLKRAGLD YWPYVVVKVH TSWAEFREYF RQQDGEKRLL AFTKRGTQIH SDFTYKRGDW
201: LVFGSETSGL PPEALFDCSA EGLGGGTVRI PMVETYVRCL NLSVSVGIAL YEASRQLNYE QLQYPLSSED ESQRLFLSED IFG

Best Arabidopsis Sequence Match ( AT5G26880.1 )
(BLAST)

001: MESCCRSVIA SRTFHLRSSG RLFPSLSLTH LKGKLSLSIN SFSSKIQSHA LRGVGIGESD KKNPLPRGAG EGVKEDARSK LLHVVLVSPQ IPGNTGCIAR
101: TCAASAVGLH LVGPLGFQVD DARVKRAGLD YWPFVVVKAH SSWAEFQEYF RLQEGEKRMI AFTKRGTRIH SDFSYRSGDY LLFGSETSGL PPEALSDCNH
201: EPYGGGTLRI PMVETYVRCL NLSVSVGIAL YEASRQLNYE QIECAPQGCV NGEEPLLTED IFA

Arabidopsis Description

AGL26AGL26 [Source:UniProtKB/TrEMBL;Acc:A0A178UI04]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.