Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU80943 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 25.88 | 34.2 |
| TraesCS7A01G245500.1 | Wheat | mitochondrion | 32.94 | 33.33 |
| TraesCS7B01G146000.1 | Wheat | mitochondrion | 32.94 | 33.33 |
| TraesCS7D01G244100.1 | Wheat | mitochondrion | 32.94 | 33.33 |
| VIT_13s0064g01270.t01 | Wine grape | plastid | 29.41 | 30.0 |
| Solyc01g086900.2.1 | Tomato | plastid | 29.41 | 29.07 |
| Zm00001d031439_P001 | Maize | mitochondrion | 32.55 | 28.82 |
| PGSC0003DMT400017734 | Potato | cytosol, mitochondrion, plastid | 12.55 | 28.32 |
| KRH43478 | Soybean | plastid | 27.84 | 27.31 |
| CDX82513 | Canola | plastid | 27.84 | 25.91 |
| AT5G26880.1 | Thale cress | plastid | 26.67 | 25.86 |
| GSMUA_Achr7P02040_001 | Banana | mitochondrion | 28.63 | 25.8 |
| CDX75734 | Canola | plastid | 28.24 | 23.61 |
| Os08t0506500-00 | Rice | mitochondrion | 20.0 | 20.9 |
| HORVU7Hr1G050430.1 | Barley | extracellular | 7.45 | 16.24 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G050390.9 | EnsemblPlantsGene:HORVU7Hr1G050390 | Gene3D:3.40.1280.10 | GO:GO:0001510 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 |
| InterPro:IPR029026 | InterPro:tRNA_cyt/urid_MeTfrase | InterPro:tRNA_m1G_MTases_N | PANTHER:PTHR42971 | PANTHER:PTHR42971:SF2 | SEG:seg |
| UniParc:UPI000B463917 | UniProt:A0A287WFZ5 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:181142607..181144683
Molecular Weight (calculated)
29367.4 Da
IEP (calculated)
10.890
GRAVY (calculated)
-0.573
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: GKLSARRKKP PPPPPSREIK NGGGLAAARS CPQPRRIRRI FSGRSRLRAS PTAPRSLFIC LLFRCSCFQR QWSRSWTRGE RRGGRARQED APCGAGFPYD
101: PRKYRINCKD LCSVSSWPPS CRGKPLGFHV DDTKLKRAGL DYWPYVVVKI HDSWGEFRDY FMKQDGQKRL LAFTKRGTHV HSVSNYSLWF YQSGRFGHPH
201: GLQMQQFSPL IYVVIYPLCP KISVSSLVQL CTRASTNLWH LFWDGGSIYE TERIL
101: PRKYRINCKD LCSVSSWPPS CRGKPLGFHV DDTKLKRAGL DYWPYVVVKI HDSWGEFRDY FMKQDGQKRL LAFTKRGTHV HSVSNYSLWF YQSGRFGHPH
201: GLQMQQFSPL IYVVIYPLCP KISVSSLVQL CTRASTNLWH LFWDGGSIYE TERIL
001: MESCCRSVIA SRTFHLRSSG RLFPSLSLTH LKGKLSLSIN SFSSKIQSHA LRGVGIGESD KKNPLPRGAG EGVKEDARSK LLHVVLVSPQ IPGNTGCIAR
101: TCAASAVGLH LVGPLGFQVD DARVKRAGLD YWPFVVVKAH SSWAEFQEYF RLQEGEKRMI AFTKRGTRIH SDFSYRSGDY LLFGSETSGL PPEALSDCNH
201: EPYGGGTLRI PMVETYVRCL NLSVSVGIAL YEASRQLNYE QIECAPQGCV NGEEPLLTED IFA
101: TCAASAVGLH LVGPLGFQVD DARVKRAGLD YWPFVVVKAH SSWAEFQEYF RLQEGEKRMI AFTKRGTRIH SDFSYRSGDY LLFGSETSGL PPEALSDCNH
201: EPYGGGTLRI PMVETYVRCL NLSVSVGIAL YEASRQLNYE QIECAPQGCV NGEEPLLTED IFA
Arabidopsis Description
AGL26AGL26 [Source:UniProtKB/TrEMBL;Acc:A0A178UI04]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.