Factsheet for Bra001317.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73970	Canola	cytosol	99.1	99.1
Bra029757.1-P	Field mustard	cytosol, plastid	95.27	93.17
Bra034064.1-P	Field mustard	cytosol, plastid	89.41	90.43
AT3G09300.1	Thale cress	nucleus, plastid	92.12	89.3
Bra009613.1-P	Field mustard	nucleus	78.6	79.32
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	79.05	76.81
Bra039764.1-P	Field mustard	endoplasmic reticulum	29.05	25.85
Bra000639.1-P	Field mustard	nucleus, plastid	31.53	17.88
Bra000774.1-P	Field mustard	nucleus	27.93	17.87
Bra020844.1-P	Field mustard	plastid	28.15	17.29
Bra013624.1-P	Field mustard	cytosol	27.93	17.06
Bra019814.1-P	Field mustard	cytosol	30.41	16.48
Bra008330.1-P	Field mustard	plastid	0.68	1.16

Protein Annotations

EnsemblPlants:Bra001317.1	EnsemblPlants:Bra001317.1-P	EnsemblPlantsGene:Bra001317	Gene3D:1.20.120.1290	Gene3D:2.40.160.120	InterPro:OSBP_sf
InterPro:Oxysterol-bd	InterPro:Oxysterol-bd_CS	PANTHER:PTHR10972	PANTHER:PTHR10972:SF136	PFAM:PF01237	ScanProsite:PS01013
SUPFAM:SSF144000	UniParc:UPI00025405AF	UniProt:M4CAT8	MapMan:5.8.1.1	:	:

Description

AT3G09300 (E=9e-250) ORP3B | ORP3B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3B); oxysterol binding

Coordinates

chrA03:-:15818470..15820505

Molecular Weight (calculated)

50823.8 Da

IEP (calculated)

4.816

GRAVY (calculated)

-0.636

Length

444 amino acids

Sequence
(BLAST)

001: MSMFGAIAPS ISNWVAAVTK SVNGLVGYEG VEVINPEGSN EDAAEEANKG RWNQEDRDGY WKMMHKYIGS DVTSMVTLPV IIFEPMTMLQ KMAELMEYSH
101: LLDMADQTED PYMRMVYASS WAISVYYAFQ RTWKPFNPIL GETYEMANYN GLNFISEQVS HHPPMSAGHA ENEHFTYDCT SKLKTKFLGN SIDVYPVGRT
201: RVTLKRDGVV LDLVPPLTKV HNLIFGRTWV DSPGEMIMTN LTTGDKVVLY FQPCGWFGSG RYEVDGYVYN ASEEPKILMT GKWNESMSYQ QCDGEGEPLP
301: GTELKEVWKL ADVPKDDKYQ YTHFAHKINS FDTAPKKLLP SDSRLRPDRY ALEMGDMSKS GNEKSSLEER QRAEKRTREE KGHSFTPKWF DITEEVTPTP
401: WGDLEVYQFN GKYLEHREAA DKSEDNTDPK SIPFNPWQFQ DMST

Best Arabidopsis Sequence Match ( AT3G09300.1 )
(BLAST)

001: MAPNDPKKAV GGGGSGFFAS LASSISNLGS AMTKSVNGLV PYEGLEVINP EGSTDDAEEE ASRGRWKQED RDGYWKMMQK YIGSDVTSMV TLPVIIFEPM
101: TMLQKMAELM EYSHLLDMAD KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS AGHAENEHFT YDCTSKLKTK
201: FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES
301: MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT
401: PKWFDVTEEV TATPWGDLEV YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST

Arabidopsis Description

ORP3BORP3B [Source:UniProtKB/TrEMBL;Acc:A0A178VKM3]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.