Factsheet for Bra019814.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98007	Canola	cytosol	93.77	99.1
AT1G13170.2	Thale cress	cytosol	89.99	88.05
HORVU0Hr1G010630.1	Barley	cytosol	10.87	84.76
VIT_01s0137g00290.t01	Wine grape	cytosol	73.14	75.25
KRH31371	Soybean	plastid	73.26	72.82
KRG97509	Soybean	plastid	72.89	72.54
PGSC0003DMT400027973	Potato	cytosol	70.33	71.82
Solyc05g013960.2.1	Tomato	cytosol	70.09	71.66
GSMUA_Achr9P02070_001	Banana	cytosol	65.69	71.54
GSMUA_Achr6P06750_001	Banana	cytosol	65.93	71.33
Os12t0285600-01	Rice	cytosol	63.61	68.92
Zm00001d030609_P002	Maize	cytosol	61.05	67.29
TraesCS5D01G120100.1	Wheat	cytosol	61.29	67.29
TraesCS5A01G117800.1	Wheat	cytosol	61.17	67.25
TraesCS5B01G116700.1	Wheat	cytosol	61.17	67.07
KXG23396	Sorghum	cytosol	60.2	66.8
Bra039764.1-P	Field mustard	endoplasmic reticulum	37.12	60.92
Bra000639.1-P	Field mustard	nucleus, plastid	54.7	57.22
Bra000774.1-P	Field mustard	nucleus	46.4	54.76
Bra013624.1-P	Field mustard	cytosol	47.13	53.09
Bra020844.1-P	Field mustard	plastid	46.4	52.56
Bra008330.1-P	Field mustard	plastid	12.94	41.09
Bra001317.1-P	Field mustard	cytosol	16.48	30.41
Bra029757.1-P	Field mustard	cytosol, plastid	16.73	30.18
Bra034064.1-P	Field mustard	cytosol, plastid	15.26	28.47
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	15.87	28.45
Bra009613.1-P	Field mustard	nucleus	14.41	26.82

Protein Annotations

EnsemblPlants:Bra019814.1	EnsemblPlants:Bra019814.1-P	EnsemblPlantsGene:Bra019814	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:OSBP_sf
InterPro:Oxysterol-bd	InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR10972	PANTHER:PTHR10972:SF67	PFAM:PF01237
PFAM:PF15413	PFscan:PS50003	SEG:seg	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729
UniParc:UPI000253EBF6	UniProt:M4DTH1	MapMan:35.1	:	:	:

Description

AT1G13170 (E=0.0) ORP1D | ORP1D (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1D); oxysterol binding

Coordinates

chrA06:+:4272741..4275969

Molecular Weight (calculated)

92611.1 Da

IEP (calculated)

6.331

GRAVY (calculated)

-0.621

Length

819 amino acids

Sequence
(BLAST)

001: MNPLCCIAPV SIDDRTNPVI AKPASNHQLG LLPSNHASKP SFSTQASWIS QDQLERLSSE DVNLEGKDST SNGGFFFGNG SVGAGVAGIM YKWTHYGKGW
101: RARWFELEDG VLSYYKIHGP DKIVMNPARE KGVRVIGEES VRYIRKASFG GSSNKLGAGA GAGAASRPCK PFGEVHLKVS SIRASKSDDK RLTIFTGTKT
201: LHLRCVSREN RATWVEALQV AKDLFPRVPS GDILPCEDAV VSTEKLRERL LQEGIGENLV KDCETIMLSE VSNLQNRLKV LTQKHLILLD TLRQLETEKI
301: ELETTVVDET KEHDSCCGQG RRFSDFYSVV SEVSASDSEA DNESHDGADV ESDEDDVPFF DTNDILSADA LRSASYRSRE AEGNGSIYDK DSFFSDRLQA
401: PVRIPQYPYV RRRDNLPEPK EKEKPVGLWS IIKENIGKDL SGVCLPVYFN EPLSSLQKCF EDLEYSYLID RALEWGKQGN ELMRLLNIAA FAVSGYASTE
501: GRQCKPFNPL LGETYEADYP DKGLRFFSEK ASQPTHLSPL LLQEFHHPMI VACHCEGQGW NFWGDSNIKG KFWGRSIQLD PVGVLTLTFD DGETYQWSKV
601: TTSIYNIILG KLYCDHYGTM RIKGGGNYSC RLKFKEQSVI DRNPRQVHGF VQDNRTGEKV AILIGKWDEA MYYVLGDPTT KPKGYDPMTE AVLLWERDKS
701: PTKTRYNLSP FAISLNEITP GMMDKLPPTD SRLRPDQRHL ENGEYEAANA EKLRLEQLQR QARRLQEKGW KPRWFEKDEE GNYRYVGGYW EAREKKDWDK
801: ITDIFKKQQQ QRNSVSSSS

Best Arabidopsis Sequence Match ( AT1G13170.1 )
(BLAST)

001: MNPLCCIAPV SIDDRTNPVV AKSSNHHLGL EAIPVSKHAS KPSFSTQASW ISQDQLERLS SEVVDDVNLD GKDASSSSNK GCFFFGNCVG AGAGVAGIMY
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL

Arabidopsis Description

ORP1DOSBP(Oxysterol binding protein)-related protein 1D [Source:UniProtKB/TrEMBL;Acc:F4HP28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.