Factsheet for GSMUA_Achr6P06750_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P02070_001	Banana	cytosol	85.87	86.44
HORVU0Hr1G010630.1	Barley	cytosol	11.76	84.76
Os12t0285600-01	Rice	cytosol	74.11	74.21
Zm00001d030609_P002	Maize	cytosol	71.73	73.08
KXG23396	Sorghum	cytosol	69.88	71.68
TraesCS5D01G120100.1	Wheat	cytosol	70.01	71.05
TraesCS5A01G117800.1	Wheat	cytosol	69.88	71.01
VIT_01s0137g00290.t01	Wine grape	cytosol	74.64	70.98
TraesCS5B01G116700.1	Wheat	cytosol	69.88	70.82
PGSC0003DMT400027973	Potato	cytosol	73.45	69.33
Solyc05g013960.2.1	Tomato	cytosol	73.32	69.29
CDX98007	Canola	cytosol	70.67	69.03
CDY19393	Canola	cytosol	70.94	69.02
KRH31371	Soybean	plastid	73.98	67.96
KRG97509	Soybean	plastid	73.45	67.56
Bra019814.1-P	Field mustard	cytosol	71.33	65.93
AT1G13170.2	Thale cress	cytosol	70.81	64.04
CDY51776	Canola	golgi	14.4	58.6
GSMUA_Achr5P20840_001	Banana	cytosol	38.44	56.73
GSMUA_Achr10P...	Banana	plastid	59.84	55.72
GSMUA_Achr2P07260_001	Banana	plastid	51.26	55.04
GSMUA_Achr11P...	Banana	cytosol	49.41	54.68
GSMUA_Achr6P36780_001	Banana	cytosol	48.48	53.19
GSMUA_Achr11P...	Banana	cytosol	48.61	51.61
GSMUA_Achr3P21140_001	Banana	nucleus	59.84	32.04
GSMUA_Achr1P17320_001	Banana	cytosol	17.44	28.63
GSMUA_Achr9P03900_001	Banana	cytosol	16.91	28.01

Protein Annotations

Gene3D:2.30.29.30	Gene3D:2.40.160.120	MapMan:35.1	ncoils:Coil	EnsemblPlantsGene:GSMUA_Achr6G06750_001	EnsemblPlants:GSMUA_Achr6P06750_001
EnsemblPlants:GSMUA_Achr6T06750_001	InterPro:IPR001849	InterPro:IPR011993	UniProt:M0T4S4	InterPro:OSBP_sf	InterPro:Oxysterol-bd
PFAM:PF01237	PFAM:PF15413	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972
PANTHER:PTHR10972:SF67	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI0002968474	SEG:seg

Description

oxysterol-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G06750_001]

Coordinates

chr6:-:4573014..4582650

Molecular Weight (calculated)

85701.2 Da

IEP (calculated)

5.187

GRAVY (calculated)

-0.542

Length

757 amino acids

Sequence
(BLAST)

001: MNPLCCIAPV SLERGDRGNP SPAPAILPDS DAAAACREAA EESAAVVEGG DGRGVNGAVA GVLWKWVNFG KGWRSRWFVL QDGVLSYYKV RGPDRILMGP
101: VASEAGVRVI GEESLRRPFG EVHLKVSSIR TSKSDDKRLY IFTGTKTLHL RCNSREDRTT WIEALFSAKE HFARLLTSNE FEPMVEVTVS TEKLRERLLL
201: ERLSEATVRE CESIMLSEIS ELQNKLKSLQ QKHLILLDTL SKLETEKVEL ETTVVDETKE REAHLGLVNG RFSDFYSVIS EGTATDSEAD NESQGADVET
301: DEDDGMYFDT RDFLSSELLR SGSYRSRELM GNGVAGSTFG IESSFPDSTQ DIGLGVRTLE YPYVKRRNKL PEPKEKEKPV GLWSIIKENI GKDLSGVCLP
401: VYFNEPLSSL QKCFEDLEYS DLVDRALEWG RQGNSLMRIL HIAAFAVSGY ASTEGRQCKP FNPLLGETYE ADFPDKGLRF FSEKVSHHPM VVACHCEGRG
501: WNFWGDSNLK GKFWGRSIQL DPIGILTLQF EDGETFQWSK VTTSIYNIII GKIYCDHYGT MRIKGSGDYS CKLKFKEQSI IDRNPHQVHG FVQDNRTGNK
601: VAMLMGKWDE AIYYVLGDPS TKPKGYDPMS EAVLLWERDK SVTQTRYNLT PFAISLNELR PSLMEKLPPT DSRLRPDQRH LENGEYELAN LEKLRLEQLQ
701: RQARRLQEKG WQPRWFKKDG DDDCYRYMGG YWEARESGNW EGIPDIFGQG DTPLGTD

Best Arabidopsis Sequence Match ( AT1G13170.1 )
(BLAST)

001: MNPLCCIAPV SIDDRTNPVV AKSSNHHLGL EAIPVSKHAS KPSFSTQASW ISQDQLERLS SEVVDDVNLD GKDASSSSNK GCFFFGNCVG AGAGVAGIMY
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL

Arabidopsis Description

ORP1DOSBP(Oxysterol binding protein)-related protein 1D [Source:UniProtKB/TrEMBL;Acc:F4HP28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.