Factsheet for GSMUA_Achr10P19570_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G024620.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	8.36	88.31
HORVU2Hr1G031380.1	Barley	cytosol	34.44	82.35
HORVU3Hr1G049220.1	Barley	cytosol	17.84	81.46
CDX75168	Canola	endoplasmic reticulum	46.25	75.35
CDY59861	Canola	endoplasmic reticulum	45.39	73.95
Bra039764.1-P	Field mustard	endoplasmic reticulum	45.26	73.75
OQU91126	Sorghum	plastid	72.69	73.69
TraesCS4A01G271700.1	Wheat	plastid	71.96	72.85
TraesCS4D01G039500.1	Wheat	plastid	72.69	72.25
TraesCS4B01G042300.2	Wheat	plastid	72.32	72.15
Zm00001d033669_P003	Maize	plastid	72.08	71.46
CDX83144	Canola	nucleus, plastid	68.27	70.79
Bra000639.1-P	Field mustard	nucleus, plastid	68.14	70.75
CDY34011	Canola	nucleus, plastid	67.77	70.28
Zm00001d013470_P007	Maize	plastid	69.74	69.4
AT2G31030.1	Thale cress	cytosol	41.7	69.33
AT4G08180.4	Thale cress	cytosol	68.27	68.18
VIT_07s0031g02980.t01	Wine grape	plastid	64.08	67.93
AT2G31020.1	Thale cress	plastid	64.7	67.61
GSMUA_Achr2P07260_001	Banana	plastid	58.18	67.09
GSMUA_Achr5P20840_001	Banana	cytosol	40.47	64.13
KRH63940	Soybean	nucleus, plastid	59.53	60.88
GSMUA_Achr9P02070_001	Banana	cytosol	56.21	60.77
GSMUA_Achr6P06750_001	Banana	cytosol	55.72	59.84
KRH53998	Soybean	plastid	58.67	59.77
PGSC0003DMT400029169	Potato	nucleus	56.46	59.3
CDX75169	Canola	plastid	41.45	58.92
Solyc07g006100.2.1	Tomato	nucleus	56.58	58.9
PGSC0003DMT400020224	Potato	cytosol	46.86	58.35
GSMUA_Achr11P...	Banana	cytosol	48.95	58.19
Solyc12g010510.1.1	Tomato	cytosol, mitochondrion, plastid	46.86	58.08
GSMUA_Achr11P...	Banana	cytosol	49.82	56.8
GSMUA_Achr6P36780_001	Banana	cytosol	45.51	53.62
GSMUA_Achr3P21140_001	Banana	nucleus	82.53	47.45
GSMUA_Achr1P17320_001	Banana	cytosol	16.73	29.5
GSMUA_Achr9P03900_001	Banana	cytosol	16.11	28.67

Protein Annotations

Gene3D:2.30.29.30	Gene3D:2.40.160.120	MapMan:35.1	ncoils:Coil	EnsemblPlantsGene:GSMUA_Achr10G19570_001	EnsemblPlants:GSMUA_Achr10P19570_001
EnsemblPlants:GSMUA_Achr10T19570_001	InterPro:IPR001849	InterPro:IPR011993	UniProt:M0RJN2	InterPro:OSBP_sf	InterPro:Oxysterol-bd
PFAM:PF01237	PFAM:PF15413	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972
PANTHER:PTHR10972:SF100	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI000296773C	SEG:seg

Description

oxysterol-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G19570_001]

Coordinates

chr10:+:25904150..25913736

Molecular Weight (calculated)

91933.6 Da

IEP (calculated)

6.993

GRAVY (calculated)

-0.774

Length

813 amino acids

Sequence
(BLAST)

001: MNPFCCASPV PVSPVAAAAS AFSSSAATHS LPALPPPPPP PPPPPSSSAA AGRSRDSFPH QNHINNGGSC RPSGPAGAAA SDHGRHHRAS GPAPEILASA
101: SLRSSFHDAP LEQREVRLNN IVGNGIAGIL HKWVNYGKGW RPRWFVLQDG VLSYYKIHGP DRIENGRTHL PRKPIGEVHL KARVSSIRES RSDDKRFSIF
201: TGTRRLHLRA ETREDRVAWM ESLQAVKDMF PRNSNGEFTG SVDKVVVSTD KLRQRLQEEG VGEATIQECE QIMRSEFAAL QNQLMLLKQN QNLLVDHLGQ
301: LETEKVDLEN TVVDEGQRQS RQSKEYGSAA RSRQEKYSEE SASESDYDNE KPDAAEEETD EEDNTFFDTR DFLSSSSFKS TESDFHRSEF DSDDENDHGV
401: DSVGSSDSSM QYVGYNYPYV KRRKKLPDPI EKEKGVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EDLEYSYLVD RAYEYGKKGN GLMRMLNVAA
501: FAVSGYASTD GRTCKPFNPL LGETYEADYP DKGLRFFSEK VSHHPMVVAC HCEGKGWRFW GDSNLKSKFW GRSIQVDPVG VLTLEFDDGE VFQWSKVTTS
601: IYNLILGKLY CDHYGTMRIQ GNREYSCKLK FKEQSIIDRN PHQVQGIVQD RSGKTVATLI GKWDESMHYV NGDCSGKGKG SDPFSEAHIL WKRSKPPKYP
701: TRYNLTRFAM TINELTPGLK EKLPPTDSRL RPDQRCLENG EFEMANSEKL RLEQRQRQAR KMQERGWKPR WFAKDKGSDM YRYIGGYWEA REEGKWDGCP
801: DIFGQVAIDQ MID

Best Arabidopsis Sequence Match ( AT4G08180.1 )
(BLAST)

001: MHPFCCVTTV SDHSPSMPPL PEPQPPLPNY AADFGSARSE PIITRSASQS YNHSGQFNNN LIHSLSFNHH QSDVTDRLGQ RVLALPAAVR EPPVDVKIND
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SEGTATESDD DNERGDAAEE EFDEEENTFF DTRDFLSSSS FKSSGSGFRT SSFSSDEDGF
401: ESEDDIDPSI KSIGCNYPRV KRRKNLPDPV EKEKSVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EDLEYSYLLD RAFEYGKRGN SLMRILNVAA
501: FAVSGYASTE GRICKPFNPL LGETYEADYP DKGLRFFSEK VSHHPMVVAC HCDGTGWKFW GDSNLRSKFW GRSIQLDPVG VLTLQFDDGE ILQWSKVTTS
601: IYNLILGKLY CDHYGTMRIE GSAEYSCKLK FKEQSIIDRN PHQVHGIVQN KSGKTVATMF GKWDESIHFV TGDCSGKGKL SEDMSGAQLL WKRSKPPGNA
701: TKYNLTRFAI TLNELTPGLK ERLPPTDSRL RPDQRYLENG EFEMANTEKL RLEQRQRQAR KMQERGWKPR WFMKEKGSES YRYKGGYWEA REDGSWVDCP
801: DIFGHIDSDQ QMIE

Arabidopsis Description

ORP1COxysterol-binding protein-related protein 1C [Source:UniProtKB/Swiss-Prot;Acc:Q8L751]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.