Factsheet for GSMUA_Achr2P07260_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 3
plastid 4
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G024620.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	8.94	81.82
HORVU3Hr1G049220.1	Barley	cytosol	19.29	76.4
HORVU2Hr1G031380.1	Barley	cytosol	30.92	64.12
CDX75168	Canola	endoplasmic reticulum	42.7	60.32
Bra000639.1-P	Field mustard	nucleus, plastid	66.81	60.15
CDX83144	Canola	nucleus, plastid	66.81	60.08
CDY34011	Canola	nucleus, plastid	66.38	59.69
TraesCS4A01G271700.1	Wheat	plastid	67.66	59.4
OQU91126	Sorghum	plastid	67.38	59.23
TraesCS4D01G039500.1	Wheat	plastid	68.09	58.68
TraesCS4B01G042300.2	Wheat	plastid	67.66	58.53
CDY59861	Canola	endoplasmic reticulum	41.42	58.52
Bra039764.1-P	Field mustard	endoplasmic reticulum	41.28	58.32
GSMUA_Achr10P...	Banana	plastid	67.09	58.18
VIT_07s0031g02980.t01	Wine grape	plastid	62.98	57.89
AT4G08180.4	Thale cress	cytosol	66.67	57.74
Zm00001d033669_P003	Maize	plastid	66.67	57.32
Zm00001d013470_P007	Maize	plastid	65.82	56.79
AT2G31020.1	Thale cress	plastid	62.13	56.3
AT2G31030.1	Thale cress	cytosol	38.72	55.83
GSMUA_Achr5P20840_001	Banana	cytosol	39.15	53.8
KRH53998	Soybean	plastid	59.57	52.63
PGSC0003DMT400029169	Potato	nucleus	57.73	52.58
GSMUA_Achr9P02070_001	Banana	cytosol	56.03	52.53
KRH63940	Soybean	nucleus, plastid	59.15	52.45
Solyc07g006100.2.1	Tomato	nucleus	57.59	51.98
GSMUA_Achr6P06750_001	Banana	cytosol	55.04	51.26
GSMUA_Achr11P...	Banana	cytosol	48.94	50.44
PGSC0003DMT400020224	Potato	cytosol	45.25	48.85
Solyc12g010510.1.1	Tomato	cytosol, mitochondrion, plastid	45.25	48.63
GSMUA_Achr11P...	Banana	cytosol	48.09	47.55
GSMUA_Achr6P36780_001	Banana	cytosol	46.52	47.54
CDX75169	Canola	plastid	37.59	46.33
GSMUA_Achr3P21140_001	Banana	nucleus	72.2	36.0
GSMUA_Achr1P17320_001	Banana	cytosol	16.88	25.81
GSMUA_Achr9P03900_001	Banana	cytosol	16.31	25.16

Protein Annotations

EnsemblPlants:GSMUA_Achr2P07260_001	EnsemblPlants:GSMUA_Achr2T07260_001	EnsemblPlantsGene:GSMUA_Achr2G07260_001	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:OSBP_sf
InterPro:Oxysterol-bd	InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR10972	PANTHER:PTHR10972:SF100	PFAM:PF01237
PFAM:PF15413	PFscan:PS50003	SEG:seg	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729
UniParc:UPI00029487E8	UniProt:M0S5W7	MapMan:35.1	:	:	:

Description

oxysterol-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G07260_001]

Coordinates

chr2:-:11795324..11802896

Molecular Weight (calculated)

80489.3 Da

IEP (calculated)

8.027

GRAVY (calculated)

-0.684

Length

705 amino acids

Sequence
(BLAST)

001: MAPSPPPAAA IREGHHHHHH HNGCRWPSLP LGASASDNGR PRRRRLLILP PSEPSSPCCS SARDSRFRGD LRLNDIVRNG VSGVLHKWVN YGMGWRLRWF
101: VLQDGVLSYY KIHGPDRIEL APDDELSSKV IGEESFRRIS RRKKGHPHLP RRPVGEIHLK ARINLSPSHF HAIWPFSIFS GTKRLHLRAD TRENRLVWVE
201: ALQAVKDMFP RISNSELMAP MDNVIVSTEK LRQRLLEEGL SEAAIQDSEQ IMRSEFASLQ NQVVLLKQKQ ILLLDTLRQL ETEKVDLENT LIDENHKRSR
301: ECESTSVPEN GKFSGACSPE VSPSESDYDN GRHDPVEEEI DEEDNTFFDT KDFLSSIEKE KGVNLEYSYL IDQAYECGKK GDGLMRILNV AAFAVSGYAS
401: TEGRSCKPFN PLLGETYEAE YPEKGLKFFA EKVSHHPMIV ACHCEGNGWK FWGDSNLRSK FWGRSIQLDP VGILSVEFDD GEVFQWNKVT TSIYNLILGK
501: LYCDHYGTMR IQGNGEYSCK LKFKEQSIID RNPHQVQGVV LDRSGKTVAT LIGKWDDSMH YMAGDVSGKG NRAESFSEAQ LLWKRSKPSK HPTRYNLTRF
601: AITLNELTPG LKEKLPPTDS RLRPDQRCLE NGEYEIANSE KLRLEQRQRQ ARKMQETGWK PRWFAKDKAS GTYRYLGGYW ETRGKGSWDG CPDIFGQIPS
701: NHLIE

Best Arabidopsis Sequence Match ( AT2G31020.1 )
(BLAST)

001: MHPFCCVSDH SPSTPSFSMY AATPETPFGS ARSQPVITRS VSQRYNHPGQ SNHHHLLHSL SFNHQNVLAL PAAAREPPVD VKINDIAGNS IAGILYKWVN
101: YGKGWRPRWF VLQDGVLSYY KIKGPDKIVV IHETEKGSRV IGEESTRMIS RNKRHAATNN TNHQLRRKPF GEVHLKVSSI RESRSDDKRF SIFTGTKRLH
201: LRAETREDRE AWIEALQAVK DMFPRMSNCE LMAPTNNLDI SIEKLRLRLV EEGVSESAIQ DCEQITRSEF SAIQSQLLLL KQKQWLLIDT LRQLETEKVD
301: LENTVVDETQ RQAGNGDSEE TISESDDDNE QFDEAEEEMD TCDSLSSSSF KSIGSVFRTS SFSSDDDGLT NGFESENDDV DPSIKTIGFN YPHVKRRKKL
401: PDPVEKEKSV SLWSMIKDNI GKDLTKVCLP VYFNEPLSSL QKCFEDLEYS YLLDQASEWG KRGNNLMRIL NVAAFAVSGY ASTEGRICKP FNPMLGETYE
501: ADYPDKGLRF FSEKVSHHPM IVACHCDGTG WKFWGDSNLK SKFWGRSIQL DPIGLLTLQF DDGEIVQWSK VTTSIYNLIL GKLYCDHYGT MKIEGNGEYS
601: CKLKFKEQSM IDRNPHQVQG IVEDKNGKTV ARLFGKWDES IHYVMVDQGK VNESHLLWKR NKQPENPTKY NLTRFGITLN ELTPGLKEKL PPTDSRLRPD
701: QRYLEKGEYE MGNAEKLRLE QRQRQAREMQ ERGWKPKWFR KEKGSETYRY IGGYWEARDS GSWDDCPDIF GQVHQSIK

Arabidopsis Description

ORP1AORP1A [Source:UniProtKB/TrEMBL;Acc:A0A178VQE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.