CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53998	Soybean	plastid	86.04	85.71
HORVU6Hr1G024620.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	7.67	79.22
HORVU2Hr1G031380.1	Barley	cytosol	31.07	72.65
HORVU3Hr1G049220.1	Barley	cytosol	15.72	70.22
VIT_07s0031g02980.t01	Wine grape	plastid	61.64	63.89
KRH53184	Soybean	plastid	62.52	62.99
KRH64734	Soybean	plastid	61.89	62.84
TraesCS4A01G271700.1	Wheat	plastid	62.26	61.64
OQU91126	Sorghum	plastid	62.01	61.47
TraesCS4B01G042300.2	Wheat	plastid	62.52	60.98
KRH16599	Soybean	plastid	60.0	60.84
TraesCS4D01G039500.1	Wheat	plastid	62.52	60.76
KRH18807	Soybean	plastid	60.13	60.74
Zm00001d033669_P003	Maize	plastid	62.14	60.24
GSMUA_Achr10P...	Banana	plastid	60.88	59.53
GSMUA_Achr2P07260_001	Banana	plastid	52.45	59.15
Zm00001d013470_P007	Maize	plastid	60.38	58.75
PGSC0003DMT400029169	Potato	nucleus	55.97	57.49
Solyc07g006100.2.1	Tomato	nucleus	56.23	57.23
Solyc12g010510.1.1	Tomato	cytosol, mitochondrion, plastid	46.42	56.25
PGSC0003DMT400020224	Potato	cytosol	45.91	55.9
KRH04091	Soybean	cytosol	48.93	50.65
KRH77382	Soybean	cytosol	48.68	50.26
KRH31371	Soybean	plastid	52.08	50.24
KRH28046	Soybean	cytosol	48.3	50.13
KRG97509	Soybean	plastid	51.7	49.94
KRH57364	Soybean	cytosol	48.18	49.74
KRG93817	Soybean	cytosol	4.91	43.33
GSMUA_Achr3P21140_001	Banana	nucleus	62.14	34.94
KRH29789	Soybean	endoplasmic reticulum	15.85	28.0
KRG99957	Soybean	cytosol, plastid	16.23	27.92
KRH10248	Soybean	endoplasmic reticulum	15.97	27.85
KRH24783	Soybean	plastid	15.72	27.78
KRH49107	Soybean	endoplasmic reticulum	16.1	27.59

Protein Annotations

EntrezGene:100807703	Gene3D:2.40.160.120	MapMan:35.1	UniProt:A0A0R0KJR5	EMBL:ACUP02002730	ncoils:Coil
EnsemblPlantsGene:GLYMA_04G206000	InterPro:IPR001849	EnsemblPlants:KRH63940	ProteinID:KRH63940	ProteinID:KRH63940.1	InterPro:OSBP_sf
InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF15413	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972
PANTHER:PTHR10972:SF100	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI0006EDD60F	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:47855940..47864595

Molecular Weight (calculated)

90740.7 Da

IEP (calculated)

7.846

GRAVY (calculated)

-0.734

Length

795 amino acids

Sequence
(BLAST)

001: MNSFCGSQHR TKPVPARISD QPTSTSSSSD HHHPMAPPAT SPVFRFRSLS SCAHNRPSPL SSSFTATTVK RSTSVRFTRQ HTATRNEVML KDIVGSGISG
101: ILYKWVNYGR GWRPRWFVLH DGVLSYYNIH GPDKLVLNHE VEAEAMVIGE ESLRRINSHR HCPSRNHKPV SEIHLMVCSV RENRSDERRF SVCTGTKKRL
201: HLRAESKEDR ATWVKAMMAV KDLFPRLSNA EAMSPVASVL VSTERLRDRL LMEGVSETAI RESEEIMKSE FSQLQKHIVA LKQQQSLLMD TLRHLEAEKV
301: DLENTLIEDR RQSKDETDPY LSTQKKYSEG SGDDSSEEHY RNNHSEDEDD AFYDTCDDIL STGSDHPRSC HDSECEEIIP NGDEKSPTGS VGFNHPHIKR
401: RKNLPDPVEK ESSVSLWSII KDNIGKDLTK VCLPVYFNEP LSSLQKCFED LEYSYLLDQA YEWGKMGDNL KRVLHVAAFA VSGYASTNGR SCKPFNPLLG
501: ETYEAEYQDK GIRFISEKVS HHPMIVACHC EGKGWKFWGD SNLKSKFWGR SIQLDPVGLL TVEFDDGEVF HWSKVTTSIY NLILGKVYCV HYGTMRVEGN
601: RDYLCKIKFK EQSIIDRNPH QIHGVVEDKK GRTVATLFGT WDESLHYVIG GNSGKGKGSS YVSSKPHVLW KRSPTPEYQT RYNLTQFAIT LNEITPGLKE
701: KLPPTDSRLR PDQRCLENGQ HEMANSEKLR LEQSQRQARK VQEKGWKPRW FAKEKGSNSY RYVGGYWEAR EKGNWESCPD IFGQVSTDTD FNPTS

Best Arabidopsis Sequence Match ( AT2G31020.1 )
(BLAST)

001: MHPFCCVSDH SPSTPSFSMY AATPETPFGS ARSQPVITRS VSQRYNHPGQ SNHHHLLHSL SFNHQNVLAL PAAAREPPVD VKINDIAGNS IAGILYKWVN
101: YGKGWRPRWF VLQDGVLSYY KIKGPDKIVV IHETEKGSRV IGEESTRMIS RNKRHAATNN TNHQLRRKPF GEVHLKVSSI RESRSDDKRF SIFTGTKRLH
201: LRAETREDRE AWIEALQAVK DMFPRMSNCE LMAPTNNLDI SIEKLRLRLV EEGVSESAIQ DCEQITRSEF SAIQSQLLLL KQKQWLLIDT LRQLETEKVD
301: LENTVVDETQ RQAGNGDSEE TISESDDDNE QFDEAEEEMD TCDSLSSSSF KSIGSVFRTS SFSSDDDGLT NGFESENDDV DPSIKTIGFN YPHVKRRKKL
401: PDPVEKEKSV SLWSMIKDNI GKDLTKVCLP VYFNEPLSSL QKCFEDLEYS YLLDQASEWG KRGNNLMRIL NVAAFAVSGY ASTEGRICKP FNPMLGETYE
501: ADYPDKGLRF FSEKVSHHPM IVACHCDGTG WKFWGDSNLK SKFWGRSIQL DPIGLLTLQF DDGEIVQWSK VTTSIYNLIL GKLYCDHYGT MKIEGNGEYS
601: CKLKFKEQSM IDRNPHQVQG IVEDKNGKTV ARLFGKWDES IHYVMVDQGK VNESHLLWKR NKQPENPTKY NLTRFGITLN ELTPGLKEKL PPTDSRLRPD
701: QRYLEKGEYE MGNAEKLRLE QRQRQAREMQ ERGWKPKWFR KEKGSETYRY IGGYWEARDS GSWDDCPDIF GQVHQSIK

Arabidopsis Description

ORP1AORP1A [Source:UniProtKB/TrEMBL;Acc:A0A178VQE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.