Factsheet for Zm00001d013470_P007

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91126	Sorghum	plastid	92.17	93.89
Zm00001d033669_P003	Maize	plastid	92.29	91.95
HORVU6Hr1G024620.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	8.45	89.61
TraesCS4A01G271700.1	Wheat	plastid	85.07	86.55
TraesCS4B01G042300.2	Wheat	plastid	85.68	85.89
HORVU2Hr1G031380.1	Barley	cytosol	35.74	85.88
TraesCS4D01G039500.1	Wheat	plastid	85.92	85.82
HORVU3Hr1G049220.1	Barley	cytosol	18.24	83.71
CDX75168	Canola	endoplasmic reticulum	44.8	73.35
CDY59861	Canola	endoplasmic reticulum	43.94	71.94
Bra039764.1-P	Field mustard	endoplasmic reticulum	43.82	71.74
GSMUA_Achr10P...	Banana	plastid	69.4	69.74
CDX83144	Canola	nucleus, plastid	66.71	69.52
Bra000639.1-P	Field mustard	nucleus, plastid	66.59	69.48
CDY34011	Canola	nucleus, plastid	66.34	69.13
AT2G31030.1	Thale cress	cytosol	40.76	68.1
AT4G08180.4	Thale cress	cytosol	66.34	66.58
VIT_07s0031g02980.t01	Wine grape	plastid	61.81	65.84
GSMUA_Achr2P07260_001	Banana	plastid	56.79	65.82
AT2G31020.1	Thale cress	plastid	62.55	65.68
KRH53998	Soybean	plastid	59.0	60.4
KRH63940	Soybean	nucleus, plastid	58.75	60.38
PGSC0003DMT400029169	Potato	nucleus	56.18	59.3
Solyc07g006100.2.1	Tomato	nucleus	56.55	59.15
CDX75169	Canola	plastid	41.25	58.92
PGSC0003DMT400020224	Potato	cytosol	46.76	58.5
Solyc12g010510.1.1	Tomato	cytosol, mitochondrion, plastid	46.51	57.93
Zm00001d030609_P002	Maize	cytosol	51.77	56.93
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	47.12	52.38
Zm00001d048544_P003	Maize	cytosol	44.43	48.59
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	44.68	48.28
Zm00001d049556_P002	Maize	cytosol	41.86	46.47
GSMUA_Achr3P21140_001	Banana	nucleus	72.58	41.94
Zm00001d028606_P002	Maize	cytosol	15.91	28.2
Zm00001d047812_P001	Maize	extracellular	15.91	27.9
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	9.18	24.35
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	10.4	23.88
Zm00001d012754_P001	Maize	cytosol	7.83	20.32
Zm00001d006081_P001	Maize	cytosol	4.16	20.12
Zm00001d052202_P001	Maize	cytosol	9.67	19.6
Zm00001d040358_P001	Maize	cytosol	10.4	16.67

Protein Annotations

EnsemblPlants:Zm00001d013470_P007	EnsemblPlants:Zm00001d013470_T007	EnsemblPlantsGene:Zm00001d013470	EntrezGene:100381915	Gene3D:2.40.160.120	InterPro:IPR001849
InterPro:OSBP_sf	InterPro:Oxysterol-bd	InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR10972	PANTHER:PTHR10972:SF100
PFAM:PF01237	PFAM:PF15413	PFscan:PS50003	ProteinID:AQK63611.1	SEG:seg	SMART:SM00233
SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI000843D1D8	UniProt:A0A1D6GJR2	MapMan:35.1	:

Description

Oxysterol-binding protein-related protein 1C

Coordinates

chr5:-:12371240..12392241

Molecular Weight (calculated)

92074.4 Da

IEP (calculated)

7.050

GRAVY (calculated)

-0.662

Length

817 amino acids

Sequence
(BLAST)

001: MHPFCCAPLV PVSPAASAAP AASSAVAGTQ AVMPPPQPPP LPPPPPRNNS ATGGERRARA AGVSGGGGGD SSPLEGVKLN EIVGGGISGI MYKWVNYGRG
101: WRPRWFALHE GVLSFYKIHG PDRIILSRET ERGAKVIGEE SLRRLNRPSA FSPSHSNGHH HPRNPIGEIH LKVSTVRESR SDDRRFSIFS GTKTLHLRAE
201: TREDRAAWLE ALRVTKDMFP RMSSSEMVGP GDTAAAVAVS TERLRQRLQQ EGVSEAAIAD SERIVREEFE ALHKQLVLAK QKHALLLETL RQLETEKVDL
301: ENTLVDESQR QSKEYGSASK PRHEKYSEGS ASESDDYNEP QDPAEETDDE ANLYFDTRDF LSSSSFKSSG SDFQRSEAGS DDEDDYPMDG INPSMKSIGV
401: SYAYVRRRNR LPDPVEKEKG VSLWSMIKDN IGKDLTKVCL PVYFNEPLSS LQKCFEDLEY SYLIDRASEW GKRGNSLMRI LSIAAFAVSG YASTDGRSCK
501: PFNPLLGETY EADYPDKGLR FFSEKVSHHP MVIACHCVGT GWRFWADSNL KSKFWGRSIQ LDPVGALTLE FDDGEVFQWS KVTTSIYNLI LGKLYCDHYG
601: TMRIQGNCEY SCKLKFKEQS IIDRNPHQTS LVYFSELYLV QPMHMQVQGV VQDRNGRTVA TLFGKWDESM HYVMGDCFGK GMGTEQFSEA HLLWKRSKPP
701: NFPTRYNLTR FAITLNELTP GLKEKLPPTD SRLRPDQRCL EKGEYERANA EKLRLEQKQR QARKMQDSGW KPRWFAKDKA TDTYRYLGGY WESREKSSWE
801: GCPDIFGQDP NDLMIAD

Best Arabidopsis Sequence Match ( AT2G31020.1 )
(BLAST)

001: MHPFCCVSDH SPSTPSFSMY AATPETPFGS ARSQPVITRS VSQRYNHPGQ SNHHHLLHSL SFNHQNVLAL PAAAREPPVD VKINDIAGNS IAGILYKWVN
101: YGKGWRPRWF VLQDGVLSYY KIKGPDKIVV IHETEKGSRV IGEESTRMIS RNKRHAATNN TNHQLRRKPF GEVHLKVSSI RESRSDDKRF SIFTGTKRLH
201: LRAETREDRE AWIEALQAVK DMFPRMSNCE LMAPTNNLDI SIEKLRLRLV EEGVSESAIQ DCEQITRSEF SAIQSQLLLL KQKQWLLIDT LRQLETEKVD
301: LENTVVDETQ RQAGNGDSEE TISESDDDNE QFDEAEEEMD TCDSLSSSSF KSIGSVFRTS SFSSDDDGLT NGFESENDDV DPSIKTIGFN YPHVKRRKKL
401: PDPVEKEKSV SLWSMIKDNI GKDLTKVCLP VYFNEPLSSL QKCFEDLEYS YLLDQASEWG KRGNNLMRIL NVAAFAVSGY ASTEGRICKP FNPMLGETYE
501: ADYPDKGLRF FSEKVSHHPM IVACHCDGTG WKFWGDSNLK SKFWGRSIQL DPIGLLTLQF DDGEIVQWSK VTTSIYNLIL GKLYCDHYGT MKIEGNGEYS
601: CKLKFKEQSM IDRNPHQVQG IVEDKNGKTV ARLFGKWDES IHYVMVDQGK VNESHLLWKR NKQPENPTKY NLTRFGITLN ELTPGLKEKL PPTDSRLRPD
701: QRYLEKGEYE MGNAEKLRLE QRQRQAREMQ ERGWKPKWFR KEKGSETYRY IGGYWEARDS GSWDDCPDIF GQVHQSIK

Arabidopsis Description

ORP1AORP1A [Source:UniProtKB/TrEMBL;Acc:A0A178VQE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.