Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93817 | Soybean | cytosol | 15.88 | 71.11 |
| Zm00001d040358_P001 | Maize | cytosol | 87.84 | 69.41 |
| Zm00001d037837_P002 | Maize | endoplasmic reticulum, extracellular | 48.64 | 63.64 |
| Zm00001d034225_P002 | Maize | endoplasmic reticulum, extracellular | 51.36 | 58.15 |
| Zm00001d028606_P002 | Maize | cytosol | 54.09 | 47.29 |
| Zm00001d047812_P001 | Maize | extracellular | 53.85 | 46.57 |
| Os03t0274000-01 | Rice | plasma membrane | 50.62 | 44.06 |
| TraesCS4B01G207800.1 | Wheat | cytosol | 50.12 | 43.63 |
| TraesCS4D01G208700.1 | Wheat | golgi | 50.12 | 43.63 |
| TraesCS4A01G096600.1 | Wheat | cytosol | 49.88 | 43.41 |
| HORVU4Hr1G059840.1 | Barley | cytosol | 49.88 | 43.32 |
| GSMUA_Achr9P03900_001 | Banana | cytosol | 48.39 | 42.67 |
| KRH10248 | Soybean | endoplasmic reticulum | 47.89 | 42.32 |
| GSMUA_Achr1P17320_001 | Banana | cytosol | 48.14 | 42.08 |
| KRH24783 | Soybean | plastid | 46.9 | 42.0 |
| KRH29789 | Soybean | endoplasmic reticulum | 46.9 | 42.0 |
| CDX80271 | Canola | cytosol | 47.15 | 41.48 |
| Bra002568.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 46.9 | 41.36 |
| CDY33036 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 46.9 | 41.36 |
| AT5G59420.1 | Thale cress | cytosol, plastid | 46.65 | 41.14 |
| VIT_08s0007g00480.t01 | Wine grape | cytosol | 45.41 | 41.03 |
| Solyc10g084800.1.1 | Tomato | extracellular, plastid | 46.4 | 40.83 |
| VIT_06s0004g04930.t01 | Wine grape | cytosol | 46.15 | 40.79 |
| KRH49107 | Soybean | endoplasmic reticulum | 45.91 | 39.87 |
| KRG99957 | Soybean | cytosol, plastid | 45.16 | 39.39 |
| PGSC0003DMT400028593 | Potato | cytosol, plastid | 46.65 | 37.38 |
| Zm00001d029872_P002 | Maize | cytosol, extracellular, nucleus | 20.84 | 11.43 |
| Zm00001d048544_P003 | Maize | cytosol | 20.84 | 11.24 |
| Zm00001d012754_P001 | Maize | cytosol | 8.68 | 11.11 |
| Zm00001d047105_P007 | Maize | cytosol, extracellular, nucleus | 20.35 | 10.85 |
| Zm00001d030609_P002 | Maize | cytosol | 19.35 | 10.5 |
| Zm00001d033669_P003 | Maize | plastid | 20.35 | 10.0 |
| Zm00001d013470_P007 | Maize | plastid | 19.6 | 9.67 |
| Zm00001d049556_P002 | Maize | cytosol | 15.88 | 8.7 |
| Zm00001d006081_P001 | Maize | cytosol | 0.74 | 1.78 |
Protein Annotations
| EnsemblPlants:Zm00001d052202_P001 | EnsemblPlants:Zm00001d052202_T001 | EnsemblPlantsGene:Zm00001d052202 | Gene3D:2.40.160.120 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase |
| InterPro:IPR029058 | InterPro:OSBP_sf | InterPro:Oxysterol-bd | PANTHER:PTHR10972 | PANTHER:PTHR10972:SF136 | PFAM:PF01237 |
| ProteinID:AQK56466.1 | SEG:seg | SUPFAM:SSF144000 | SUPFAM:SSF53474 | UniParc:UPI00097CD7D8 | UniProt:A0A1Q0YW67 |
| MapMan:5.8.1.1 | : | : | : | : | : |
Description
Oxysterol-binding protein-related protein 3B
Coordinates
chr4:-:183190874..183196421
Molecular Weight (calculated)
45647.9 Da
IEP (calculated)
7.112
GRAVY (calculated)
-0.241
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNDEFNGIT RNPGLDLYPA HLRASIDEAN ELVYDAINND VYKCGFAKKK DDRVLVPDLG SLTSIHDRAR ELFYYLKGGQ VDYGEEHSKA CSHNRFGRIY
101: HTGHYPICYE HNPVHFVGHS AGAQVVRVLQ QMLADKIEHT PFNRIGETQT ILRLLSVVLH STPDRDNYWK MMHKYIGSDV TSLVTLPVII FEPMTMLQKM
201: AELMEYCELL DKADECEDPY MRMVYASTWA VSVYFAYQRT WKPFNPILGE TYEMVNHQGI TFLAEQVSHH PPMGVAHCEN EHFTYDITSK VKTKFLGNSL
301: EIYPVGRTRV TLKKSGVVLD LVPPLTKVNN PIFGRTWVDS PGEMVMTNLT IRDKVVLYFQ PCGWFGSAAA LTASALGMSG STVAPPRRGC GPWPRSSGKW
401: LTV
101: HTGHYPICYE HNPVHFVGHS AGAQVVRVLQ QMLADKIEHT PFNRIGETQT ILRLLSVVLH STPDRDNYWK MMHKYIGSDV TSLVTLPVII FEPMTMLQKM
201: AELMEYCELL DKADECEDPY MRMVYASTWA VSVYFAYQRT WKPFNPILGE TYEMVNHQGI TFLAEQVSHH PPMGVAHCEN EHFTYDITSK VKTKFLGNSL
301: EIYPVGRTRV TLKKSGVVLD LVPPLTKVNN PIFGRTWVDS PGEMVMTNLT IRDKVVLYFQ PCGWFGSAAA LTASALGMSG STVAPPRRGC GPWPRSSGKW
401: LTV
001: MAPNDPKKAV GGGGSGFFAS LASSISNLGS AMTKSVNGLV PYEGLEVINP EGSTDDAEEE ASRGRWKQED RDGYWKMMQK YIGSDVTSMV TLPVIIFEPM
101: TMLQKMAELM EYSHLLDMAD KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS AGHAENEHFT YDCTSKLKTK
201: FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES
301: MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT
401: PKWFDVTEEV TATPWGDLEV YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST
101: TMLQKMAELM EYSHLLDMAD KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS AGHAENEHFT YDCTSKLKTK
201: FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES
301: MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT
401: PKWFDVTEEV TATPWGDLEV YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST
Arabidopsis Description
ORP3BORP3B [Source:UniProtKB/TrEMBL;Acc:A0A178VKM3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.