Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006081_P001 | Maize | cytosol | 38.73 | 72.19 |
| Zm00001d028606_P002 | Maize | cytosol | 66.35 | 45.34 |
| Zm00001d047812_P001 | Maize | extracellular | 61.27 | 41.42 |
| Os03t0274000-01 | Rice | plasma membrane | 60.0 | 40.82 |
| OQU92826 | Sorghum | cytosol | 62.54 | 39.96 |
| GSMUA_Achr9P03900_001 | Banana | cytosol | 55.24 | 38.07 |
| TraesCS4D01G208700.1 | Wheat | golgi | 55.24 | 37.58 |
| HORVU4Hr1G059840.1 | Barley | cytosol | 55.24 | 37.5 |
| TraesCS4A01G096600.1 | Wheat | cytosol | 54.92 | 37.37 |
| TraesCS4B01G207800.1 | Wheat | cytosol | 54.92 | 37.37 |
| GSMUA_Achr1P17320_001 | Banana | cytosol | 54.29 | 37.09 |
| KRH29789 | Soybean | endoplasmic reticulum | 52.7 | 36.89 |
| KRH10248 | Soybean | endoplasmic reticulum | 52.7 | 36.4 |
| VIT_06s0004g04930.t01 | Wine grape | cytosol | 52.7 | 36.4 |
| KRH24783 | Soybean | plastid | 51.11 | 35.78 |
| KRG99957 | Soybean | cytosol, plastid | 51.75 | 35.28 |
| KRH49107 | Soybean | endoplasmic reticulum | 51.43 | 34.91 |
| Bra002568.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 50.48 | 34.79 |
| VIT_08s0007g00480.t01 | Wine grape | cytosol | 49.21 | 34.75 |
| CDX80271 | Canola | cytosol | 50.48 | 34.72 |
| CDY33036 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 50.16 | 34.57 |
| AT5G59420.1 | Thale cress | cytosol, plastid | 49.84 | 34.35 |
| Solyc10g084800.1.1 | Tomato | extracellular, plastid | 49.84 | 34.28 |
| PGSC0003DMT400028593 | Potato | cytosol, plastid | 49.84 | 31.21 |
| Zm00001d034225_P002 | Maize | endoplasmic reticulum, extracellular | 15.87 | 14.04 |
| Zm00001d040358_P001 | Maize | cytosol | 19.05 | 11.76 |
| Zm00001d037837_P002 | Maize | endoplasmic reticulum, extracellular | 9.84 | 10.06 |
| Zm00001d029872_P002 | Maize | cytosol, extracellular, nucleus | 20.95 | 8.98 |
| Zm00001d030609_P002 | Maize | cytosol | 20.63 | 8.75 |
| Zm00001d052202_P001 | Maize | cytosol | 11.11 | 8.68 |
| Zm00001d033669_P003 | Maize | plastid | 20.95 | 8.05 |
| Zm00001d048544_P003 | Maize | cytosol | 18.73 | 7.9 |
| Zm00001d013470_P007 | Maize | plastid | 20.32 | 7.83 |
| KRG93817 | Soybean | cytosol | 2.22 | 7.78 |
| Zm00001d049556_P002 | Maize | cytosol | 17.78 | 7.61 |
| Zm00001d047105_P007 | Maize | cytosol, extracellular, nucleus | 17.14 | 7.14 |
Protein Annotations
| EnsemblPlants:Zm00001d012754_P001 | EnsemblPlants:Zm00001d012754_T001 | EnsemblPlantsGene:Zm00001d012754 | InterPro:OSBP_sf | InterPro:Oxysterol-bd | PANTHER:PTHR10972 |
| PANTHER:PTHR10972:SF136 | PFAM:PF01237 | ProteinID:AQL00596.1 | SUPFAM:SSF144000 | UniParc:UPI0008437C66 | UniProt:A0A1D6GC20 |
| MapMan:35.1 | : | : | : | : | : |
Description
Pleckstrin homology (PH) domain superfamily protein
Coordinates
chr8:-:179865498..179868206
Molecular Weight (calculated)
35602.8 Da
IEP (calculated)
9.329
GRAVY (calculated)
-0.876
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MATYIAGVLK HKTVIKKHGI DQQTTDRAIS LTKASEKCFL IKGKYLFLHT YGQSRRCRDA GPVHLAKKKD HKPQPAGQQP VPMTSPSPPQ KTNISRSTTM
101: MQTPTDAGNC TLQWAGRYEV DGYVYSAAEE PRIMITGKWN KSLSCQPCDQ EGDSLPGTEL KEIWRVAPAP QGDKYQYTQF AHKINSFDTA PKKLLASDSR
201: LRPDRYALKK GDMSKSGAEK SSFDTTPEFL QTFRLEEQQR AEKRTREAKG EQFTPRWFNL TDVVSPTPWG DLEIYEYNGK YTEHRAAIDG SDVTDETDVT
301: SVKFSPWQYG RSSSQ
101: MQTPTDAGNC TLQWAGRYEV DGYVYSAAEE PRIMITGKWN KSLSCQPCDQ EGDSLPGTEL KEIWRVAPAP QGDKYQYTQF AHKINSFDTA PKKLLASDSR
201: LRPDRYALKK GDMSKSGAEK SSFDTTPEFL QTFRLEEQQR AEKRTREAKG EQFTPRWFNL TDVVSPTPWG DLEIYEYNGK YTEHRAAIDG SDVTDETDVT
301: SVKFSPWQYG RSSSQ
001: MAPNDPKKAV GGGGSGFFAS LASSISNLGS AMTKSVNGLV PYEGLEVINP EGSTDDAEEE ASRGRWKQED RDGYWKMMQK YIGSDVTSMV TLPVIIFEPM
101: TMLQKMAELM EYSHLLDMAD KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS AGHAENEHFT YDCTSKLKTK
201: FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES
301: MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT
401: PKWFDVTEEV TATPWGDLEV YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST
101: TMLQKMAELM EYSHLLDMAD KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS AGHAENEHFT YDCTSKLKTK
201: FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES
301: MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT
401: PKWFDVTEEV TATPWGDLEV YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST
Arabidopsis Description
ORP3BORP3B [Source:UniProtKB/TrEMBL;Acc:A0A178VKM3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.