Factsheet for Zm00001d040358_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	63.14	90.45
Zm00001d052202_P001	Maize	cytosol	69.41	87.84
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	49.22	81.49
KRG93817	Soybean	cytosol	9.02	51.11
Zm00001d028606_P002	Maize	cytosol	43.33	47.94
Zm00001d047812_P001	Maize	extracellular	43.14	47.21
Os03t0274000-01	Rice	plasma membrane	40.98	45.14
TraesCS4B01G207800.1	Wheat	cytosol	40.2	44.28
TraesCS4D01G208700.1	Wheat	golgi	40.2	44.28
TraesCS4A01G096600.1	Wheat	cytosol	40.2	44.28
HORVU4Hr1G059840.1	Barley	cytosol	40.0	43.97
KRH10248	Soybean	endoplasmic reticulum	39.22	43.86
GSMUA_Achr9P03900_001	Banana	cytosol	39.22	43.76
KRH29789	Soybean	endoplasmic reticulum	38.24	43.33
KRH24783	Soybean	plastid	38.04	43.11
CDX80271	Canola	cytosol	38.63	43.01
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	38.43	42.89
Solyc10g084800.1.1	Tomato	extracellular, plastid	38.43	42.79
CDY33036	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	38.24	42.67
VIT_06s0004g04930.t01	Wine grape	cytosol	38.04	42.54
GSMUA_Achr1P17320_001	Banana	cytosol	38.24	42.3
AT5G59420.1	Thale cress	cytosol, plastid	37.84	42.23
VIT_08s0007g00480.t01	Wine grape	cytosol	36.86	42.15
KRH49107	Soybean	endoplasmic reticulum	38.04	41.81
KRG99957	Soybean	cytosol, plastid	37.25	41.13
PGSC0003DMT400028593	Potato	cytosol, plastid	38.82	39.36
Zm00001d012754_P001	Maize	cytosol	11.76	19.05
Zm00001d006081_P001	Maize	cytosol	5.29	15.98
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	17.25	11.97
Zm00001d048544_P003	Maize	cytosol	17.45	11.91
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	17.06	11.51
Zm00001d030609_P002	Maize	cytosol	16.67	11.44
Zm00001d033669_P003	Maize	plastid	17.06	10.61
Zm00001d013470_P007	Maize	plastid	16.67	10.4
Zm00001d049556_P002	Maize	cytosol	13.33	9.24

Protein Annotations

EnsemblPlants:Zm00001d040358_P001	EnsemblPlants:Zm00001d040358_T001	EnsemblPlantsGene:Zm00001d040358	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF789
InterPro:IPR029058	InterPro:OSBP_sf	InterPro:Oxysterol-bd	PANTHER:PTHR10972	PANTHER:PTHR10972:SF136	PFAM:PF01237
PFAM:PF05623	ProteinID:ONM31218.1	SEG:seg	SUPFAM:SSF144000	SUPFAM:SSF53474	UniParc:UPI00097CD8C2
UniProt:A0A1R3PDR7	MapMan:35.1	:	:	:	:

Description

Oxysterol-binding protein-related protein 3B

Coordinates

chr3:-:39841432..39849816

Molecular Weight (calculated)

57468.2 Da

IEP (calculated)

6.625

GRAVY (calculated)

-0.525

Length

510 amino acids

Sequence
(BLAST)

001: MLNDEFNGIT RNPGLDLYPA HLRASIDEAN ELVYDAINND VYKCGFAKKK DDRVLVPDLG SLTSIHDRAR ELFYYLKGGQ VDYGEEHSKA CSHNRFGRIY
101: HTGHYPICYE HNPVHFVGHS AGAQVVRVLQ QMLADKIEHT PFNRIGETQT ILGLLSVVLH STPDRDNYWK MMHKYIGSDV TSLVTLPVII FEPMTMLQKM
201: AELMEYCELL DKAEECEDPY MRMVYASTWA VSVYFAYQRT WKPFNPILGE TYEMVNHQGI TFLAEQVKTK FLGNSLEIYP VGRTRVTLKK SGVVLDLVPP
301: LTKVNNPIFG RTWVDSPGEM VMTNLTIRDK VVLYFQPCGW FGYLNEGSDG DNAPETSSDV SNESDNDNGR SIGRTTQCLA QNICTDQERL SSDDCDSSNQ
401: EPPPVFQYME HDAPYGRQPL ADMDKPTTCG KKQKKQSAQI DVTTQQLGEP RPAFNNGIQR KAVEPERVSR AASSTRTTKP ARGVPAPPPS RTGKERKVAV
501: KLSRFQTATA

Best Arabidopsis Sequence Match ( AT3G09300.1 )
(BLAST)

001: MAPNDPKKAV GGGGSGFFAS LASSISNLGS AMTKSVNGLV PYEGLEVINP EGSTDDAEEE ASRGRWKQED RDGYWKMMQK YIGSDVTSMV TLPVIIFEPM
101: TMLQKMAELM EYSHLLDMAD KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS AGHAENEHFT YDCTSKLKTK
201: FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES
301: MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT
401: PKWFDVTEEV TATPWGDLEV YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST

Arabidopsis Description

ORP3BORP3B [Source:UniProtKB/TrEMBL;Acc:A0A178VKM3]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.