CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49107	Soybean	endoplasmic reticulum	95.89	95.47
KRH10248	Soybean	endoplasmic reticulum	80.95	82.02
KRH29789	Soybean	endoplasmic reticulum	79.0	81.11
KRH24783	Soybean	plastid	78.79	80.89
GSMUA_Achr9P03900_001	Banana	cytosol	78.79	79.65
GSMUA_Achr1P17320_001	Banana	cytosol	79.22	79.39
VIT_08s0007g00480.t01	Wine grape	cytosol	76.41	79.15
Zm00001d028606_P002	Maize	cytosol	75.11	75.27
Os03t0274000-01	Rice	plasma membrane	75.11	74.95
TraesCS4A01G096600.1	Wheat	cytosol	73.81	73.65
TraesCS4D01G208700.1	Wheat	golgi	73.59	73.43
TraesCS4B01G207800.1	Wheat	cytosol	73.59	73.43
Solyc10g084800.1.1	Tomato	extracellular, plastid	72.73	73.36
KRG93817	Soybean	cytosol	14.29	73.33
HORVU4Hr1G059840.1	Barley	cytosol	73.59	73.28
Zm00001d047812_P001	Maize	extracellular	73.81	73.18
OQU92826	Sorghum	cytosol	75.11	70.39
PGSC0003DMT400028593	Potato	cytosol, plastid	72.94	67.0
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	38.1	57.14
Zm00001d006081_P001	Maize	cytosol	20.56	56.21
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	40.48	52.53
Zm00001d012754_P001	Maize	cytosol	35.28	51.75
Zm00001d052202_P001	Maize	cytosol	39.39	45.16
Zm00001d040358_P001	Maize	cytosol	41.13	37.25
KRH64734	Soybean	plastid	30.52	18.01
KRH53184	Soybean	plastid	30.52	17.87
KRH77382	Soybean	cytosol	29.44	17.66
KRH18807	Soybean	plastid	30.09	17.66
KRH16599	Soybean	plastid	29.65	17.47
KRH04091	Soybean	cytosol	28.79	17.32
KRH28046	Soybean	cytosol	28.57	17.23
KRH57364	Soybean	cytosol	28.36	17.01
KRG97509	Soybean	plastid	29.65	16.65
KRH31371	Soybean	plastid	29.65	16.63
KRH53998	Soybean	plastid	28.14	16.29
KRH63940	Soybean	nucleus, plastid	27.92	16.23

Protein Annotations

EMBL:ACUP02011351	EnsemblPlants:KRG99957	EnsemblPlantsGene:GLYMA_18G182000	Gene3D:1.20.120.1290	Gene3D:2.40.160.120	InterPro:OSBP_sf
InterPro:Oxysterol-bd	InterPro:Oxysterol-bd_CS	PANTHER:PTHR10972	PANTHER:PTHR10972:SF136	PFAM:PF01237	ProteinID:KRG99957
ProteinID:KRG99957.1	ScanProsite:PS01013	SEG:seg	SUPFAM:SSF144000	UniParc:UPI000233EFA1	UniProt:I1N2H8
MapMan:5.8.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:43877265..43881803

Molecular Weight (calculated)

52281.5 Da

IEP (calculated)

4.950

GRAVY (calculated)

-0.566

Length

462 amino acids

Sequence
(BLAST)

001: MAPKDPKQVA AASGGGGGFF ASIASSLSNF GSAMSKSVNG LVGYEGLEVI NPEGGTEDAE EEAKKGRWKQ EERDGYWKMM QKYVGSDITS MVTLPVIIFE
101: PMTILQKMAE LMEYSYLLDM ADKTEDPYMR LVYASSFFIS IYYAYQRTWK PFNPILGETY EMVNHGGITF ISEQVSHHPP MSAGHAETEH FTYDITSKLK
201: TKFLGNSADL YPVGRTRVTL KRDGVVLDLV PPPTKVSNLI FGRTWIDSSG EMILTNLTTG DKVVLYFQPC GWFGAGRYEV DGFVYNSADE PKILMTGKWN
301: EAMNYQLCDS EGEPLPGTEL KEIWRVADAP KKDKFQYTHF AHKINSFDTA PKKLLASDSR LRPDRMALEK GDLSTSGYEK SSLEERQRTE KRNREAKGHK
401: FTPRWFDLTD EVTPTPWGDL EVYQYNGKYT EHRAAVDSSE CIEVPDSRTE FNPWQYDNLD AE

Best Arabidopsis Sequence Match ( AT5G02100.1 )
(BLAST)

001: MASNDPKNGG GFFASLASSI TNFGSAMSKS VNGLMGYEGL EVINPEGSTD DAEEEAGRGR WKQEERDGYW KMMQKYIGSD VTSMVTLPVI IFEPMTMLQK
101: MAELMEYSYL LDMADKTEDP YMRMVYASSW AISVYYAYQR TWKPFNPILG ETYEMTNHNG INFIAEQVCH HPPMSAGHAE NEHFAYDCTS KLKTKFLGNS
201: IDVYPVGRTR VTLKRDGVVL DLVPPLTKVH NLIFGRTWVD SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYNS AEEPKMLMTG KWNESLSYQP
301: CDAEGEPLPG TELKEVWKVA EAPKNDKYQY THFAHKINSF DTAPKKLLSS DSRLRPDRYA LEMGDMSKSG FEKSSLEDRQ RAEKKSREEK GQKFAPKWFD
401: ETEEVTPTPW GDLEVYQFNG KYSVHRATAE NSEDTTDVKL TQFNPWQFQD LSA

Arabidopsis Description

ORP3AOxysterol-binding protein-related protein 3A [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.