Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037837_P002 | Maize | endoplasmic reticulum, extracellular | 76.4 | 88.31 |
| KRG93817 | Soybean | cytosol | 17.7 | 70.0 |
| Zm00001d040358_P001 | Maize | cytosol | 90.45 | 63.14 |
| Zm00001d052202_P001 | Maize | cytosol | 58.15 | 51.36 |
| Zm00001d028606_P002 | Maize | cytosol | 62.36 | 48.16 |
| Zm00001d047812_P001 | Maize | extracellular | 62.36 | 47.64 |
| Os03t0274000-01 | Rice | plasma membrane | 58.71 | 45.14 |
| TraesCS4B01G207800.1 | Wheat | cytosol | 57.58 | 44.28 |
| TraesCS4D01G208700.1 | Wheat | golgi | 57.58 | 44.28 |
| GSMUA_Achr9P03900_001 | Banana | cytosol | 56.74 | 44.2 |
| TraesCS4A01G096600.1 | Wheat | cytosol | 57.3 | 44.06 |
| HORVU4Hr1G059840.1 | Barley | cytosol | 57.3 | 43.97 |
| KRH10248 | Soybean | endoplasmic reticulum | 55.62 | 43.42 |
| KRH24783 | Soybean | plastid | 54.78 | 43.33 |
| KRH29789 | Soybean | endoplasmic reticulum | 54.78 | 43.33 |
| GSMUA_Achr1P17320_001 | Banana | cytosol | 55.9 | 43.17 |
| CDX80271 | Canola | cytosol | 55.06 | 42.79 |
| Bra002568.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 54.78 | 42.67 |
| VIT_06s0004g04930.t01 | Wine grape | cytosol | 54.49 | 42.54 |
| CDY33036 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 54.49 | 42.45 |
| VIT_08s0007g00480.t01 | Wine grape | cytosol | 52.53 | 41.93 |
| Solyc10g084800.1.1 | Tomato | extracellular, plastid | 53.93 | 41.92 |
| AT5G59420.1 | Thale cress | cytosol, plastid | 53.65 | 41.79 |
| KRH49107 | Soybean | endoplasmic reticulum | 53.09 | 40.73 |
| KRG99957 | Soybean | cytosol, plastid | 52.53 | 40.48 |
| PGSC0003DMT400028593 | Potato | cytosol, plastid | 53.93 | 38.17 |
| Zm00001d012754_P001 | Maize | cytosol | 14.04 | 15.87 |
| Zm00001d006081_P001 | Maize | cytosol | 7.02 | 14.79 |
| Zm00001d048544_P003 | Maize | cytosol | 25.28 | 12.05 |
| Zm00001d029872_P002 | Maize | cytosol, extracellular, nucleus | 24.72 | 11.97 |
| Zm00001d047105_P007 | Maize | cytosol, extracellular, nucleus | 24.44 | 11.51 |
| Zm00001d030609_P002 | Maize | cytosol | 23.31 | 11.17 |
| Zm00001d033669_P003 | Maize | plastid | 24.44 | 10.61 |
| Zm00001d013470_P007 | Maize | plastid | 23.88 | 10.4 |
| Zm00001d049556_P002 | Maize | cytosol | 19.38 | 9.38 |
Protein Annotations
| EnsemblPlants:Zm00001d034225_P002 | EnsemblPlants:Zm00001d034225_T002 | EnsemblPlantsGene:Zm00001d034225 | Gene3D:2.40.160.120 | InterPro:DUF789 | InterPro:OSBP_sf |
| InterPro:Oxysterol-bd | PANTHER:PTHR10972 | PANTHER:PTHR10972:SF136 | PFAM:PF01237 | PFAM:PF05623 | ProteinID:ONM09826.1 |
| SEG:seg | SUPFAM:SSF144000 | UniParc:UPI0008435C82 | UniProt:A0A1D6L693 | MapMan:5.8.1.1 | : |
Description
Oxysterol-binding protein-related protein 3B
Coordinates
chr1:+:287120376..287136534
Molecular Weight (calculated)
39978.4 Da
IEP (calculated)
5.934
GRAVY (calculated)
-0.491
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MMHKYIGSDV TSLVTLPVII FEPMTMLQKM AELMEYCELL DKADECEDPY MRMVYASTWA VSVYFAYQRT WKPFNPILGE TYEMVNHQGI TFLAEQVSHH
101: PPMGVAHCEN EHFTYDITSK VKSKFLGNSL EIYPVGRTRV TLKKSGVVLD LVPPLTKVNN PIFGRTWVDS PGEMVMTNLT FRDKVVLYFQ PCGWFGCRYL
201: NEGSDSDNAP ETSSDVSNES DNDNGRSIGR TTQCLAQNIC TDQERLSSDD CDSSNQEPLS VFQYMEHDAP YGRQPLADMK KQSAQIDVTT QQLGEPRPAF
301: NNGIQRKAVE PERVSRAASS TRTTKPARGV PAPPPSQTGK ERKVAVKLSR FQTAAA
101: PPMGVAHCEN EHFTYDITSK VKSKFLGNSL EIYPVGRTRV TLKKSGVVLD LVPPLTKVNN PIFGRTWVDS PGEMVMTNLT FRDKVVLYFQ PCGWFGCRYL
201: NEGSDSDNAP ETSSDVSNES DNDNGRSIGR TTQCLAQNIC TDQERLSSDD CDSSNQEPLS VFQYMEHDAP YGRQPLADMK KQSAQIDVTT QQLGEPRPAF
301: NNGIQRKAVE PERVSRAASS TRTTKPARGV PAPPPSQTGK ERKVAVKLSR FQTAAA
001: MAPNDPKKAV GGGGSGFFAS LASSISNLGS AMTKSVNGLV PYEGLEVINP EGSTDDAEEE ASRGRWKQED RDGYWKMMQK YIGSDVTSMV TLPVIIFEPM
101: TMLQKMAELM EYSHLLDMAD KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS AGHAENEHFT YDCTSKLKTK
201: FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES
301: MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT
401: PKWFDVTEEV TATPWGDLEV YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST
101: TMLQKMAELM EYSHLLDMAD KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS AGHAENEHFT YDCTSKLKTK
201: FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES
301: MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT
401: PKWFDVTEEV TATPWGDLEV YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST
Arabidopsis Description
ORP3BORP3B [Source:UniProtKB/TrEMBL;Acc:A0A178VKM3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.