Factsheet for Zm00001d029872_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

extracellular 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, extracellular, mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91955	Sorghum	cytosol, extracellular, nucleus	95.65	93.24
Os10t0554100-01	Rice	cytosol	43.54	88.15
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	85.99	83.6
TraesCS1B01G224800.1	Wheat	cytosol	78.91	78.17
HORVU1Hr1G053930.1	Barley	cytosol	78.37	78.05
TraesCS1A01G210800.1	Wheat	cytosol	78.37	77.94
TraesCS1D01G214100.1	Wheat	cytosol	78.37	77.63
GSMUA_Achr5P20840_001	Banana	cytosol	47.48	68.03
Zm00001d048544_P003	Maize	cytosol	66.53	65.46
Solyc08g078960.2.1	Tomato	cytosol	45.71	64.99
GSMUA_Achr11P...	Banana	cytosol	60.27	64.77
GSMUA_Achr11P...	Banana	cytosol	61.22	63.11
VIT_02s0154g00250.t01	Wine grape	mitochondrion	40.41	60.0
PGSC0003DMT400012089	Potato	cytosol	58.1	58.73
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	56.19	57.04
AT4G22540.5	Thale cress	cytosol	55.92	57.0
Bra000774.1-P	Field mustard	nucleus	53.47	56.63
CDY21272	Canola	nucleus	53.47	56.63
CDX76366	Canola	cytosol	55.37	56.45
AT4G12460.7	Thale cress	cytosol	53.2	56.34
Bra013624.1-P	Field mustard	cytosol	55.24	55.85
CDX79161	Canola	cytosol	55.24	55.85
CDX82950	Canola	cytosol	54.97	55.57
KRH77382	Soybean	cytosol	57.96	55.32
Bra020844.1-P	Field mustard	plastid	54.01	54.91
KRH28046	Soybean	cytosol	57.01	54.7
KRH04091	Soybean	cytosol	57.01	54.56
KRH57364	Soybean	cytosol	56.6	54.03
CDY42177	Canola	cytosol	55.37	53.41
Zm00001d049556_P002	Maize	cytosol	52.65	52.58
Zm00001d030609_P002	Maize	cytosol	50.07	49.53
Zm00001d033669_P003	Maize	plastid	53.74	48.17
Zm00001d013470_P007	Maize	plastid	52.38	47.12
CDX90832	Canola	nucleus	53.61	46.41
Zm00001d028606_P002	Maize	cytosol	18.37	29.28
Zm00001d047812_P001	Maize	extracellular	18.1	28.54
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	11.97	24.72
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	10.34	24.68
Zm00001d012754_P001	Maize	cytosol	8.98	20.95
Zm00001d052202_P001	Maize	cytosol	11.43	20.84
Zm00001d006081_P001	Maize	cytosol	4.63	20.12
Zm00001d040358_P001	Maize	cytosol	11.97	17.25

Protein Annotations

EntrezGene:100502349	Gene3D:2.30.29.30	Gene3D:2.40.160.120	MapMan:35.1	UniProt:A0A1D6K891	ncoils:Coil
InterPro:IPR001849	InterPro:IPR011993	ProteinID:ONL99755.1	ProteinID:ONL99759.1	InterPro:OSBP_sf	InterPro:Oxysterol-bd
PFAM:PF01237	PFAM:PF15413	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972
PANTHER:PTHR10972:SF101	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI0004DEAE15	EnsemblPlantsGene:Zm00001d029872
EnsemblPlants:Zm00001d029872_P002	EnsemblPlants:Zm00001d029872_T002	SEG:seg	:	:	:

Description

Oxysterol-binding protein-related protein 2A

Coordinates

chr1:+:91251568..91258234

Molecular Weight (calculated)

82559.8 Da

IEP (calculated)

6.710

GRAVY (calculated)

-0.631

Length

735 amino acids

Sequence
(BLAST)

001: MRAWEMHPLC CLAGEWPASG GGLAPGDRSP PAEDAGAAPA VAGVLYKWTN IGKGWRPRWF AIRGGVLAYS KIRRRVAAEP RPEAAGGVRL IGVARGAAGA
101: AERPIGFVPL KISSFSESKS DDKRFYIITP TKTLQLRTGC ANDRATWIEA LVTARSEYSF NGDLSGDQND ASFSTEKLRN RLNAEGVGEA VIKDCEQIIH
201: SEFSQYQTQM KQRCEEYLSF IGTLPQDVEV VNSVDSTVPE KPRLELFKHD CSSSGKCSEY SNTESSDDVG KQEISELSDG DEFHFYDTRQ SFSEFASSPA
301: DPRKGCLNNG NEDHKSVESL TVDKAEKYML SHSKRRLQLP EPIEKEKGVS LWSMIKDNVG KDLTRVCLPV YFNEPLSSLQ KCFEELEYSY LLDRAYECGL
401: RGNGLMRILY VAAFAVSGYA STDSRPCKPF NPLLGETYEA DYPEKGIRFF SEKVSHHPMV MACHCEGKGW KFWGDSNLKS KFWGQSIQLD PNGVLTLEFD
501: DGEIFQWSKV TTTINNLILG RVYCHHHGTM NISGNRRYSC KLTFKEQSFL DRNPRQVQGV VKDAGGSKVA TLTGKWDESV HCVINNDASK VNSHGPHQSS
601: GSTLLWEKNE PPVNPTRYNL SAFAITLNEL TPELEEKLPP TDSRLRPDQR HLENGEYEKA NAEKLRLETQ QRMARKMQES GWKPRWFQRD SEDGTYRYVG
701: GYWEAREQRT WVGCNDIFGN LSSSQKLPPS ALYTS

Best Arabidopsis Sequence Match ( AT4G12460.1 )
(BLAST)

001: MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH
101: KNIGIVHLKV SSYRESKSDH RKFYIFTATK TLHLRTDSRS DRAAWLQALA STRGIVPLQS INGDFSFVSP KDLSISTERL KKRLFEEGMN ESLVKECEQI
201: VDSEFCEVQE QIKLLHEERK KLLDALRQLE MANLEAEASG IHDDVYQLRN HKYSSLGRGK YSECSTSASS DDKQEFEDIS EEDEASFHDT KESFGEPDVG
301: SVLTHFKRRT KLPDPAEKER GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDQAYE YGKSGKSLLR ALNVAAFAVS GYASTEGRHC
401: KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWGDTN LRSKFWGRSI QLEPVGILTL EFDDGEIFQW SKVTTTIYNI LLGKLYCDHH
501: GIMKIRGNRQ YSCMLKFKEQ SILDRNPHQV NGFVEDVTGK KAATVFGKWN DSLYYVAGDG INKASASLLW KATKAPPNVT RYNFTSFAMT LNELIPGLEE
601: KLPPTDSRLR PDQRHLENGE YEKANEEKQR LERRQRMSRQ IQESGWRPRW FEPQGESESY KYTGGYWEAR DVKSWDDCPN IFGEFTEEVA DCA

Arabidopsis Description

ORP2BOSBP(oxysterol binding protein)-related protein 2B [Source:TAIR;Acc:AT4G12460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.