Factsheet for PGSC0003DMT400012089

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g078960.2.1	Tomato	cytosol	69.88	98.26
Os10t0554100-01	Rice	cytosol	36.86	73.83
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	72.21	72.51
VIT_02s0154g00250.t01	Wine grape	mitochondrion	48.28	70.91
KRH77382	Soybean	cytosol	74.0	69.87
KRH28046	Soybean	cytosol	73.04	69.32
AT4G22540.5	Thale cress	cytosol	68.64	69.21
KRH04091	Soybean	cytosol	72.63	68.75
GSMUA_Achr5P20840_001	Banana	cytosol	48.42	68.62
CDX76366	Canola	cytosol	67.95	68.52
CDX79161	Canola	cytosol	68.5	68.5
CDX82950	Canola	cytosol	68.5	68.5
Bra013624.1-P	Field mustard	cytosol	68.5	68.5
KRH57364	Soybean	cytosol	72.21	68.18
AT4G12460.7	Thale cress	cytosol	64.1	67.15
Bra020844.1-P	Field mustard	plastid	66.58	66.94
Bra000774.1-P	Field mustard	nucleus	62.86	65.85
CDY21272	Canola	nucleus	62.86	65.85
CDY42177	Canola	cytosol	67.26	64.17
GSMUA_Achr11P...	Banana	cytosol	60.11	63.89
GSMUA_Achr6P36780_001	Banana	cytosol	58.87	62.03
GSMUA_Achr11P...	Banana	cytosol	60.52	61.71
HORVU4Hr1G088060.4	Barley	mitochondrion	52.82	59.81
TraesCS4B01G375900.1	Wheat	cytosol	58.46	59.03
HORVU1Hr1G053930.1	Barley	cytosol	59.42	58.54
Os08t0154900-00	Rice	cytosol	58.6	58.52
TraesCS7D01G297200.3	Wheat	cytosol	59.15	58.11
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	58.73	58.1
TraesCS7B01G202100.1	Wheat	cytosol	59.15	58.03
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	58.32	58.0
TraesCS1A01G210800.1	Wheat	cytosol	58.87	57.92
HORVU7Hr1G071680.28	Barley	cytosol	59.15	57.87
TraesCS1D01G214100.1	Wheat	cytosol	59.01	57.82
EER91955	Sorghum	cytosol, extracellular, nucleus	59.83	57.69
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.77	57.61
TraesCS1B01G224800.1	Wheat	cytosol	58.46	57.28
TraesCS7A01G302000.3	Wheat	cytosol	58.87	57.07
EES13369	Sorghum	cytosol	57.77	56.45
Zm00001d048544_P003	Maize	cytosol	56.26	54.75
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	55.16	54.41
CDX90832	Canola	nucleus	62.72	53.71
Zm00001d049556_P002	Maize	cytosol	53.78	53.12
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	55.16	53.04
PGSC0003DMT400074661	Potato	plastid	56.26	51.71
PGSC0003DMT400020224	Potato	cytosol	45.53	50.69
PGSC0003DMT400029169	Potato	nucleus	52.68	49.48
PGSC0003DMT400027973	Potato	cytosol	53.78	48.75
PGSC0003DMT400028593	Potato	cytosol, plastid	18.98	27.44

Protein Annotations

EntrezGene:102578345	Gene3D:2.30.29.30	Gene3D:2.40.160.120	MapMan:35.1	ncoils:Coil	InterPro:IPR001849
InterPro:IPR011993	UniProt:M1A0P6	InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF15413
EnsemblPlantsGene:PGSC0003DMG400004746	PGSC:PGSC0003DMG400004746	EnsemblPlants:PGSC0003DMT400012089	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003
PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI0002969F5D
RefSeq:XP_006355481.1	SEG:seg	:	:	:	:

Description

Oxysterol-binding family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004746]

Coordinates

chr8:-:52576020..52586013

Molecular Weight (calculated)

82925.5 Da

IEP (calculated)

6.559

GRAVY (calculated)

-0.663

Length

727 amino acids

Sequence
(BLAST)

001: MRVREMHPLC CITLETPEIG DQSPEPTLLR TGSAVVYSGS DINAGGSDVG GVAGILYKWT NYHKGWRSRW FTLRNGILSY SKNRRPDHLT GDDIRLIGKL
101: PDSNPSRRKH GKSVGIVHLK VSSFRESRSD NRRFYIFTAT KSLHLRTHSK KERVAWIEAL ISTRNLFQLR PLNDNLNLLQ NDVSISTERL KNRLLEEGIG
201: EGLVQDCEKI MLSEFSEIKG QLKNLCEERS NLLDTLRQLE AANIEGEASG VHDGEFQLMK QFSSLGRGKY SEYSTTESSD DIEKQELDEA SDEEEANYID
301: ANECFSEYHT SGGSVVGDNM ENNTIDASAQ AQVVRRTKLP DPVEKEKGVS LWAMIKDNVG KDLTRVCLPV YFNEPISSLQ KCFEDLEYSY LLDRAYEHGK
401: SGNSLLRILN VAAFAVSGYA STEGRNCKPF NPLLGETYEA DFPEKGIRFF SEKVSHHPTL IACHCEGRGW KFWADSNLKS KFWGRSIQVD PVGTLTLEFD
501: DGEIFQWSKV TTSIYNLILG KIYCDHHGTM HIRGNRQYSC KLKYKEPSII ERNPHQVHGF VEDVSGKKVT TLFGKWNESM YYINGEWASK PKDSSVLSLL
601: WTRNNPPPNL TRYNLSSFAI TLNELTPGLK EMLPPTDSRL RPDQRHLENG EYDKANAEKL RLETRQRMSR KLQENGWKPR WFQREGEDGT FRYMGGYWEA
701: RETATWDGCP NIFGEIDQDL LNSFEGS

Best Arabidopsis Sequence Match ( AT4G22540.1 )
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.