Factsheet for TraesCS1B01G224800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G210800.1	Wheat	cytosol	97.3	97.7
TraesCS1D01G214100.1	Wheat	cytosol	97.44	97.44
HORVU1Hr1G053930.1	Barley	cytosol	95.15	95.66
Os10t0554100-01	Rice	cytosol	43.67	89.26
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	78.17	78.91
EER91955	Sorghum	cytosol, extracellular, nucleus	79.65	78.38
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	73.85	72.49
TraesCS4B01G375900.1	Wheat	cytosol	69.81	71.94
GSMUA_Achr5P20840_001	Banana	cytosol	47.03	68.03
Solyc08g078960.2.1	Tomato	cytosol	45.01	64.6
GSMUA_Achr11P...	Banana	cytosol	59.16	64.18
GSMUA_Achr11P...	Banana	cytosol	60.65	63.11
VIT_02s0154g00250.t01	Wine grape	mitochondrion	40.84	61.21
PGSC0003DMT400012089	Potato	cytosol	57.28	58.46
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	55.93	57.32
AT4G22540.5	Thale cress	cytosol	55.39	57.0
TraesCS7B01G202100.1	Wheat	cytosol	56.87	56.95
AT4G12460.7	Thale cress	cytosol	52.97	56.63
CDX76366	Canola	cytosol	54.72	56.31
KRH77382	Soybean	cytosol	58.09	55.97
Bra000774.1-P	Field mustard	nucleus	52.29	55.91
CDY21272	Canola	nucleus	52.29	55.91
Bra013624.1-P	Field mustard	cytosol	54.58	55.71
CDX79161	Canola	cytosol	54.58	55.71
CDX82950	Canola	cytosol	54.45	55.57
KRH28046	Soybean	cytosol	57.28	55.48
KRH04091	Soybean	cytosol	56.87	54.95
Bra020844.1-P	Field mustard	plastid	53.23	54.63
KRH57364	Soybean	cytosol	56.6	54.55
CDY42177	Canola	cytosol	54.58	53.15
TraesCS5B01G116700.1	Wheat	cytosol	49.6	49.26
TraesCS4B01G042300.2	Wheat	plastid	52.29	47.61
CDX90832	Canola	nucleus	52.56	45.94
TraesCS4B01G207800.1	Wheat	cytosol	17.92	28.73

Protein Annotations

EnsemblPlants:TraesCS1B01G224800.1	EnsemblPlantsGene:TraesCS1B01G224800	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:OSBP_sf	InterPro:Oxysterol-bd
InterPro:PH_domain	PANTHER:PTHR10972	PANTHER:PTHR10972:SF101	PFAM:PF01237	PFAM:PF15413	PFscan:PS50003
SEG:seg	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	MapMan:35.1	:

Description

No Description!

Coordinates

chr1B:+:403412136..403418037

Molecular Weight (calculated)

83190.6 Da

IEP (calculated)

6.917

GRAVY (calculated)

-0.613

Length

742 amino acids

Sequence
(BLAST)

001: MRASEMHPLC CLAADYCPGG GGADEDDGDC SPPPADGAAV AGVLYKWTNI GRGWRPRWFA IRGGVLAYSK IRRRVAAEET PPPPTEPAAA AAAGVRVIGG
101: ADRGAGERPI GFIHLKISSF SESKSDDKRF YIITPTKTLQ LRTGCVKDRV AWIEALVSAR SEYSLGGILP SDRNGGSFST EKLRDRLHAE GVGAEIVKDC
201: EQIVHSEFSQ YHVQMKQRCE SYLSFIGSLP RELEAVNSED ATIRGNPQSQ LFKPDFSSSG KCSEYSNTES SEDAGKQEIE KMSDEDEFHF YDTRQSFSDG
301: VASPDLKVRY LNYGNEACKF GDSLAADKTN EYLLSSAKRR SKLPEPVEKE RSVSLWSMIK DNVGKDLTRV CLPVYFNEPL SSLQKCFEEL EYSYLLDRAY
401: ECGLRGNGLM RILYVAAFAV SGYASTDSRP CKPFNPLLGE TYEADYPEKG IRFFSEKVSH HPMAMACHCE GKGWKFWGDS NVKSKFWGQS IQLDPSGILT
501: LEFDDGETFQ WSKVTTTINN LIIGRVYCHH HGTMNISGNK KYSCKLMFKE QSFLERNPRQ VQGFVKDADG TKVASLMGKW DESMYCVVSD DASKLNSHTS
601: HQSAGATLLW KKNEPPADPT RYNLSSFAIT LNELTPGLKE KLPPTDSRLR PDQRHLENGE YEKANSEKLR LETRQRMARN MQESGWKPRW FQRDSEHGTY
701: RYVGGYWEAR EQTKWVGCSD IFGSFCDNPK PRVSTLYTSA SV

Best Arabidopsis Sequence Match ( AT4G12460.1 )
(BLAST)

001: MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH
101: KNIGIVHLKV SSYRESKSDH RKFYIFTATK TLHLRTDSRS DRAAWLQALA STRGIVPLQS INGDFSFVSP KDLSISTERL KKRLFEEGMN ESLVKECEQI
201: VDSEFCEVQE QIKLLHEERK KLLDALRQLE MANLEAEASG IHDDVYQLRN HKYSSLGRGK YSECSTSASS DDKQEFEDIS EEDEASFHDT KESFGEPDVG
301: SVLTHFKRRT KLPDPAEKER GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDQAYE YGKSGKSLLR ALNVAAFAVS GYASTEGRHC
401: KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWGDTN LRSKFWGRSI QLEPVGILTL EFDDGEIFQW SKVTTTIYNI LLGKLYCDHH
501: GIMKIRGNRQ YSCMLKFKEQ SILDRNPHQV NGFVEDVTGK KAATVFGKWN DSLYYVAGDG INKASASLLW KATKAPPNVT RYNFTSFAMT LNELIPGLEE
601: KLPPTDSRLR PDQRHLENGE YEKANEEKQR LERRQRMSRQ IQESGWRPRW FEPQGESESY KYTGGYWEAR DVKSWDDCPN IFGEFTEEVA DCA

Arabidopsis Description

ORP2BOSBP(oxysterol binding protein)-related protein 2B [Source:TAIR;Acc:AT4G12460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.