Factsheet for TraesCS1A01G210800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G214100.1	Wheat	cytosol	97.83	97.44
TraesCS1B01G224800.1	Wheat	cytosol	97.7	97.3
HORVU1Hr1G053930.1	Barley	cytosol	95.67	95.8
Os10t0554100-01	Rice	cytosol	43.71	88.98
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	77.94	78.37
EER91955	Sorghum	cytosol, extracellular, nucleus	79.43	77.85
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	73.75	72.09
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	69.96	70.72
GSMUA_Achr5P20840_001	Banana	cytosol	47.23	68.03
Solyc08g078960.2.1	Tomato	cytosol	45.47	64.99
GSMUA_Achr11P...	Banana	cytosol	59.68	64.47
GSMUA_Achr11P...	Banana	cytosol	61.3	63.53
VIT_02s0154g00250.t01	Wine grape	mitochondrion	41.0	61.21
PGSC0003DMT400012089	Potato	cytosol	57.92	58.87
AT4G22540.5	Thale cress	cytosol	55.75	57.14
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	55.89	57.04
CDX76366	Canola	cytosol	55.35	56.73
AT4G12460.7	Thale cress	cytosol	53.04	56.48
TraesCS7A01G302000.3	Wheat	cytosol	56.97	56.13
CDY21272	Canola	nucleus	52.64	56.05
Bra000774.1-P	Field mustard	nucleus	52.64	56.05
CDX79161	Canola	cytosol	54.94	55.85
Bra013624.1-P	Field mustard	cytosol	54.94	55.85
KRH77382	Soybean	cytosol	58.19	55.84
CDX82950	Canola	cytosol	54.8	55.71
KRH28046	Soybean	cytosol	57.24	55.22
Bra020844.1-P	Field mustard	plastid	53.99	55.19
KRH04091	Soybean	cytosol	56.83	54.69
KRH57364	Soybean	cytosol	56.56	54.29
CDY42177	Canola	cytosol	55.07	53.41
TraesCS5A01G117800.1	Wheat	cytosol	49.39	48.99
TraesCS4A01G271700.1	Wheat	plastid	52.23	48.07
CDX90832	Canola	nucleus	52.91	46.05
TraesCS4A01G096600.1	Wheat	cytosol	18.4	29.37

Protein Annotations

EnsemblPlants:TraesCS1A01G210800.1	EnsemblPlantsGene:TraesCS1A01G210800	Gene3D:2.30.29.30	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:IPR011993
InterPro:OSBP_sf	InterPro:Oxysterol-bd	InterPro:PH-like_dom_sf	InterPro:PH_domain	PANTHER:PTHR10972	PANTHER:PTHR10972:SF101
PFAM:PF01237	PFscan:PS50003	SEG:seg	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:373313646..373319695

Molecular Weight (calculated)

82966.5 Da

IEP (calculated)

7.182

GRAVY (calculated)

-0.610

Length

739 amino acids

Sequence
(BLAST)

001: MRAREMHPLC CLAADFCPGG GGAAEEDDGD CSPPPADGAA VAGVLHKWTN IGRGWRPRWF AIRGGVLAYS KIRRRVAAEE ATPQPTEPAA GVRVIGGADR
101: GAGERPIGFV HLKISSFSES KSDDKRFYII TPTKTLQLRT GCVKDRVAWI EALVSARSEY SLGGILPSDR NGGSFSTEKL RDRLHAEGVG AEIVKDCEQI
201: VHSEFSQYHV QMKQRCESYL SFIGSLPREL EAVNSEDATI RGNPQSQLFK PDFSSSGKCS EYSNTESSED AGKQEIGKMS DEDEFHFYDT RQSFSDSVAS
301: PDVKVRYLNY GNEACKFGDS LAADRTNEYL LSSAKRRSKL PEPVEKERSV SLWSMIKDNV GKDLTRVCLP VYFNEPLSSL QKCFEELEYS YLLDRAYECG
401: LRGNGLMRIL YVAAFAVSGY ASTDSRPCKP FNPLLGETYE ADYPEKGIRF FSEKVSHHPM AMACHCEGKG WKFWGDSNLK SKFWGQSIQV DPSGILTLEF
501: DDGETFQWSK VTTTINNLII GRVYCHHHGT MSISGNKKYS CKLMFKEQSF LERNPRQVQG FVKDADGTKV ASLMGKWDES MYCVVSDDAS KLNSHISHQS
601: AGATLLWKKN EPPADPTRYN LSSFAITLNE LTPGLKEKLP PTDSRLRPDQ RHLENGEYEK ANSEKLRLET RQRMARNMQE SGWKPRWFQR DSEHGTYRYV
701: GGYWEAREQT KWVGCSDIFG SFCDNPKPRV STLYTSASV

Best Arabidopsis Sequence Match ( AT4G12460.1 )
(BLAST)

001: MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH
101: KNIGIVHLKV SSYRESKSDH RKFYIFTATK TLHLRTDSRS DRAAWLQALA STRGIVPLQS INGDFSFVSP KDLSISTERL KKRLFEEGMN ESLVKECEQI
201: VDSEFCEVQE QIKLLHEERK KLLDALRQLE MANLEAEASG IHDDVYQLRN HKYSSLGRGK YSECSTSASS DDKQEFEDIS EEDEASFHDT KESFGEPDVG
301: SVLTHFKRRT KLPDPAEKER GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDQAYE YGKSGKSLLR ALNVAAFAVS GYASTEGRHC
401: KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWGDTN LRSKFWGRSI QLEPVGILTL EFDDGEIFQW SKVTTTIYNI LLGKLYCDHH
501: GIMKIRGNRQ YSCMLKFKEQ SILDRNPHQV NGFVEDVTGK KAATVFGKWN DSLYYVAGDG INKASASLLW KATKAPPNVT RYNFTSFAMT LNELIPGLEE
601: KLPPTDSRLR PDQRHLENGE YEKANEEKQR LERRQRMSRQ IQESGWRPRW FEPQGESESY KYTGGYWEAR DVKSWDDCPN IFGEFTEEVA DCA

Arabidopsis Description

ORP2BOSBP(oxysterol binding protein)-related protein 2B [Source:TAIR;Acc:AT4G12460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.