Factsheet for AT4G22540.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79161	Canola	cytosol	90.98	90.23
Bra013624.1-P	Field mustard	cytosol	90.98	90.23
CDX82950	Canola	cytosol	90.71	89.96
CDX76366	Canola	cytosol	89.6	89.6
Bra020844.1-P	Field mustard	plastid	87.79	87.55
CDY42177	Canola	cytosol	88.21	83.46
AT4G12460.7	Thale cress	cytosol	79.2	82.28
Solyc08g078960.2.1	Tomato	cytosol	51.59	71.95
Os10t0554100-01	Rice	cytosol	35.51	70.52
KRH77382	Soybean	cytosol	74.2	69.48
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	69.63	69.34
KRH28046	Soybean	cytosol	73.37	69.06
PGSC0003DMT400012089	Potato	cytosol	69.21	68.64
KRH04091	Soybean	cytosol	72.4	67.97
KRH57364	Soybean	cytosol	72.54	67.92
VIT_02s0154g00250.t01	Wine grape	mitochondrion	46.46	67.68
GSMUA_Achr5P20840_001	Banana	cytosol	47.43	66.67
GSMUA_Achr11P...	Banana	cytosol	60.61	63.89
GSMUA_Achr6P36780_001	Banana	cytosol	57.98	60.58
GSMUA_Achr11P...	Banana	cytosol	59.64	60.31
AT2G31030.1	Thale cress	cytosol	39.25	57.87
Os08t0154900-00	Rice	cytosol	58.11	57.55
HORVU7Hr1G071680.28	Barley	cytosol	58.81	57.07
TraesCS7B01G202100.1	Wheat	cytosol	58.53	56.95
TraesCS7D01G297200.3	Wheat	cytosol	58.25	56.76
TraesCS4B01G375900.1	Wheat	cytosol	56.45	56.53
HORVU4Hr1G088060.4	Barley	mitochondrion	50.21	56.39
TraesCS7A01G302000.3	Wheat	cytosol	58.25	56.0
HORVU1Hr1G053930.1	Barley	cytosol	57.28	55.96
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	57.0	55.92
TraesCS1A01G210800.1	Wheat	cytosol	57.14	55.75
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	56.45	55.68
TraesCS1D01G214100.1	Wheat	cytosol	57.28	55.66
TraesCS1B01G224800.1	Wheat	cytosol	57.0	55.39
EES13369	Sorghum	cytosol	57.14	55.38
EER91955	Sorghum	cytosol, extracellular, nucleus	57.84	55.3
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.76	55.14
Zm00001d048544_P003	Maize	cytosol	55.2	53.28
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	54.23	53.05
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	54.65	52.12
Zm00001d049556_P002	Maize	cytosol	52.84	51.77
AT2G31020.1	Thale cress	plastid	53.95	50.0
AT4G08180.4	Thale cress	cytosol	56.03	49.63
AT1G13170.2	Thale cress	cytosol	53.26	45.88
AT1G77730.1	Thale cress	plastid	12.76	34.72
AT5G59420.1	Thale cress	cytosol, plastid	18.17	28.67
AT3G09300.1	Thale cress	nucleus, plastid	17.89	28.17
AT5G02100.1	Thale cress	cytosol, plastid	17.61	28.04

Protein Annotations

Gene3D:2.40.160.120	MapMan:35.1	EntrezGene:828349	UniProt:A0A178UYT2	ProteinID:AEE84619.1	ProteinID:AEE84620.1
ProteinID:AEE84621.1	ProteinID:AEE84622.1	EMBL:AK222178	EMBL:AK229811	ProteinID:ANM66311.1	ProteinID:ANM66312.1
ArrayExpress:AT4G22540	EnsemblPlantsGene:AT4G22540	RefSeq:AT4G22540	TAIR:AT4G22540	RefSeq:AT4G22540-TAIR-G	EnsemblPlants:AT4G22540.5
EMBL:AY052361	Unigene:At.23326	EMBL:BT001093	ProteinID:CAA22159.1	ProteinID:CAB79209.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0008289
InterPro:IPR001849	RefSeq:NP_001031698.1	RefSeq:NP_001190800.1	RefSeq:NP_001328217.1	RefSeq:NP_001328218.1	RefSeq:NP_567662.1
RefSeq:NP_974592.1	ProteinID:OAO99226.1	Symbol:ORP2A	InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237
PFAM:PF15413	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	UniProt:Q940Y1
SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI00000AC36B	:	:

Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]

Coordinates

chr4:-:11860444..11866441

Molecular Weight (calculated)

82046.6 Da

IEP (calculated)

7.046

GRAVY (calculated)

-0.648

Length

721 amino acids

Sequence
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.