Factsheet for GSMUA_Achr11P21100_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P20840_001	Banana	cytosol	61.55	82.07
GSMUA_Achr11P...	Banana	cytosol	80.85	77.56
Os10t0554100-01	Rice	cytosol	39.62	74.66
Solyc08g078960.2.1	Tomato	cytosol	50.29	66.54
GSMUA_Achr6P36780_001	Banana	cytosol	66.96	66.38
VIT_02s0154g00250.t01	Wine grape	mitochondrion	46.05	63.64
Os08t0154900-00	Rice	cytosol	65.35	61.4
AT4G22540.5	Thale cress	cytosol	63.89	60.61
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	64.77	60.27
PGSC0003DMT400012089	Potato	cytosol	63.89	60.11
HORVU7Hr1G071680.28	Barley	cytosol	65.2	60.03
HORVU1Hr1G053930.1	Barley	cytosol	64.62	59.89
Bra013624.1-P	Field mustard	cytosol	63.6	59.83
CDX79161	Canola	cytosol	63.6	59.83
TraesCS7B01G202100.1	Wheat	cytosol	64.77	59.78
TraesCS7D01G297200.3	Wheat	cytosol	64.62	59.73
CDX82950	Canola	cytosol	63.45	59.7
TraesCS1A01G210800.1	Wheat	cytosol	64.47	59.68
TraesCS1D01G214100.1	Wheat	cytosol	64.62	59.57
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.45	59.53
AT4G12460.7	Thale cress	cytosol	60.38	59.51
HORVU4Hr1G088060.4	Barley	mitochondrion	55.85	59.5
TraesCS4B01G375900.1	Wheat	cytosol	62.57	59.44
EER91955	Sorghum	cytosol, extracellular, nucleus	65.5	59.42
TraesCS1B01G224800.1	Wheat	cytosol	64.18	59.16
CDX76366	Canola	cytosol	62.28	59.08
EES13369	Sorghum	cytosol	63.89	58.74
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	62.13	58.7
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	62.72	58.69
TraesCS7A01G302000.3	Wheat	cytosol	64.33	58.67
Bra000774.1-P	Field mustard	nucleus	59.36	58.5
CDY21272	Canola	nucleus	59.21	58.36
KRH04091	Soybean	cytosol	64.18	57.16
Bra020844.1-P	Field mustard	plastid	60.38	57.12
KRH77382	Soybean	cytosol	63.89	56.75
Zm00001d048544_P003	Maize	cytosol	61.84	56.63
KRH57364	Soybean	cytosol	63.74	56.62
KRH28046	Soybean	cytosol	63.01	56.27
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	61.11	55.29
CDY42177	Canola	cytosol	61.4	55.12
Zm00001d049556_P002	Maize	cytosol	59.06	54.89
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	59.06	54.82
GSMUA_Achr9P02070_001	Banana	cytosol	55.7	50.66
GSMUA_Achr6P06750_001	Banana	cytosol	54.68	49.41
GSMUA_Achr10P...	Banana	plastid	58.19	48.95
GSMUA_Achr2P07260_001	Banana	plastid	50.44	48.94
CDX90832	Canola	nucleus	59.36	47.82
GSMUA_Achr3P21140_001	Banana	nucleus	59.21	28.64
GSMUA_Achr1P17320_001	Banana	cytosol	19.01	28.2
GSMUA_Achr9P03900_001	Banana	cytosol	18.71	28.01

Protein Annotations

EnsemblPlants:GSMUA_Achr11P21100_001	EnsemblPlants:GSMUA_Achr11T21100_001	EnsemblPlantsGene:GSMUA_Achr11G21100_001	Gene3D:2.30.29.30	Gene3D:2.40.160.120	InterPro:IPR001849
InterPro:IPR011993	InterPro:OSBP_sf	InterPro:Oxysterol-bd	InterPro:PH-like_dom_sf	InterPro:PH_domain	PANTHER:PTHR10972
PANTHER:PTHR10972:SF88	PFAM:PF01237	PFscan:PS50003	SEG:seg	SMART:SM00233	SUPFAM:SSF144000
SUPFAM:SSF50729	UniParc:UPI000294FA23	UniProt:M0RU40	MapMan:35.1	:	:

Description

oxysterol-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G21100_001]

Coordinates

chr11:-:21852434..21865282

Molecular Weight (calculated)

78771.2 Da

IEP (calculated)

6.959

GRAVY (calculated)

-0.618

Length

684 amino acids

Sequence
(BLAST)

001: MRAREMPHPL CCISIDCPEL GGRSPPVPAH PPPGRDGYGD GFSVAVAGVL CKWTNIGKGW RYRWFSLQSG VLSYSKIRRG DPPLVPDGGG PVRVVHLKVS
101: SFRESKTDDR RFYIFSPTKT LRLRTRSSID RVAWIQALIL ATKEFALRRE ISFIPNDASI STEKLRARMQ VEGLDESLIR DCEQIIHSEF SEYHRQLKLQ
201: YEEHLSSIST FHRQLEEVDL DVGISEAQVQ LTKYDYSSSA HVKFNEYSTT ESSDDVEKQE LDDLSDEDEF SFFDTSECFG DSASKLNYQN MLLHTKRRTK
301: LPKPIEREKG VSLWSIIKDN VGKDLTKVCL PVYFNEPLSS LQKCFEDLEY SYLLDQAYEH GKKGNGLMRI LNVAAFAVSG YSSCDGRLCK PFNPLLGETY
401: EADYPEKGVR FFAEKVSHHP MLIACHCEGR GWKFWGDSNL RSKFRGQSIQ LDPLGVLTLE FDDGEIFQWS KVTTTIYNLI LGKVHCNHHG TMNILGNRQY
501: SCKLKFKEQS LLDRNPHQVL GFVESMNGSK VATLVGKWDD SMYFSFGDEI LKTKSSVSTE NANLLWKRNK PPTEPTRYNL TSFAITLNEL TSELKEKLPP
601: TDSRLRPDQR YLENGEYEKA NTEKLRLEKR QRMSRKLQEN GWKPRWFQRD SEDATFCYIG GYWEARDQQK WDDCMDIFGE YSMN

Best Arabidopsis Sequence Match ( AT4G22540.1 )
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.