CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000774.1-P	Field mustard	nucleus	99.28	99.28
AT4G12460.7	Thale cress	cytosol	89.63	89.63
CDX90832	Canola	nucleus	98.56	80.57
CDX82950	Canola	cytosol	81.12	77.44
CDX79161	Canola	cytosol	80.98	77.3
CDX76366	Canola	cytosol	80.12	77.12
CDY42177	Canola	cytosol	79.11	72.05
Os10t0554100-01	Rice	cytosol	36.6	69.97
Solyc08g078960.2.1	Tomato	cytosol	50.58	67.89
VIT_02s0154g00250.t01	Wine grape	mitochondrion	46.83	65.66
KRH77382	Soybean	cytosol	71.47	64.42
GSMUA_Achr5P20840_001	Banana	cytosol	47.26	63.94
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	66.57	63.81
KRH28046	Soybean	cytosol	70.32	63.71
PGSC0003DMT400012089	Potato	cytosol	65.85	62.86
KRH04091	Soybean	cytosol	69.45	62.76
KRH57364	Soybean	cytosol	69.31	62.47
CDX75168	Canola	endoplasmic reticulum	43.37	60.32
GSMUA_Achr11P...	Banana	cytosol	58.36	59.21
CDY59861	Canola	endoplasmic reticulum	42.36	58.92
GSMUA_Achr6P36780_001	Banana	cytosol	56.2	56.52
GSMUA_Achr11P...	Banana	cytosol	57.2	55.68
Os08t0154900-00	Rice	cytosol	58.07	55.36
HORVU4Hr1G088060.4	Barley	mitochondrion	50.43	54.52
TraesCS7B01G202100.1	Wheat	cytosol	58.07	54.39
TraesCS7D01G297200.3	Wheat	cytosol	57.93	54.32
HORVU7Hr1G071680.28	Barley	cytosol	58.07	54.24
TraesCS4B01G375900.1	Wheat	cytosol	55.91	53.89
TraesCS7A01G302000.3	Wheat	cytosol	58.21	53.87
EES13369	Sorghum	cytosol	57.64	53.76
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	56.63	53.47
HORVU1Hr1G053930.1	Barley	cytosol	56.34	52.98
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	55.76	52.94
EER91955	Sorghum	cytosol, extracellular, nucleus	57.2	52.65
TraesCS1A01G210800.1	Wheat	cytosol	56.05	52.64
TraesCS1D01G214100.1	Wheat	cytosol	56.05	52.43
TraesCS1B01G224800.1	Wheat	cytosol	55.91	52.29
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.47	51.85
CDY34011	Canola	nucleus, plastid	57.78	51.15
CDX83144	Canola	nucleus, plastid	57.64	51.02
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	53.31	50.2
Zm00001d049556_P002	Maize	cytosol	52.88	49.86
Zm00001d048544_P003	Maize	cytosol	53.46	49.67
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	53.75	49.34
CDX98007	Canola	cytosol	54.03	48.39
CDY19393	Canola	cytosol	54.03	48.2
CDY51776	Canola	golgi	10.81	40.32
CDX75169	Canola	plastid	31.7	38.46
CDY14648	Canola	plastid	11.82	31.78
CDY64064	Canola	plastid	11.82	31.78
CDY33036	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	18.73	28.45
CDX80271	Canola	cytosol	18.59	28.17
CDY07917	Canola	cytosol	18.01	28.15
CDY44693	Canola	cytosol, plastid	18.3	27.97
CDX73970	Canola	cytosol	17.87	27.93
CDY41621	Canola	cytosol, plastid	18.16	27.81
CDY40331	Canola	cytosol, plastid	18.16	27.81
CDY10468	Canola	cytosol	18.01	27.59
CDY22188	Canola	nucleus	6.92	27.27

Protein Annotations

Gene3D:2.40.160.120	MapMan:35.1	UniProt:A0A078G8C0	EnsemblPlants:CDY21272	ProteinID:CDY21272	ProteinID:CDY21272.1
ncoils:Coil	EnsemblPlantsGene:GSBRNA2T00015597001	InterPro:IPR001849	InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237
PFAM:PF15413	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	SMART:SM00233
SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI0004EDE113	:	:	:

Description

BnaC03g29560DBnaC03g29560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8C0]

Coordinates

chrLK032119:+:92205..97333

Molecular Weight (calculated)

79546.1 Da

IEP (calculated)

7.424

GRAVY (calculated)

-0.745

Length

694 amino acids

Sequence
(BLAST)

001: MPLTRSKSLP STDAIAENGG SDRQNLSSGR SVAGILHKWT NYGKGWRSRW FLLRDGILSY SKIRRPENVN LLSPSDDVRL IGDNSTDRLS RMYSCSGRGR
101: RKHHKTIGIV HLKVSSYRES KSDNKKFYIF TANKTLHLRT DSRSDRAAWL QALASTRRIL PLQSISGDFS FVSPTDLSIS TERLKKRLRE NGINENLVKE
201: CEEIVDSEFS EVQEQIKLLH EERTKLLDAL KQLEMANLEA EASGIHESVY QLPNHNYSSL RSGKYSECST SASSDVFEDI SEEDEPSFHD TIECFSEPDA
301: GSENMHFKRR TRLPDPAEKE KGVSLWSMIK DNVGKDLSRV CLPVYFNEPI SSLQKCFEDL EYSYLLDQAY EYGKSGNSLL RALYVAAFAV SGYASTEGRH
401: CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQLEPVGVLT LEFDDGETFQ WSKVTTTIYN ILLGKLYCDH
501: HGTMQIRGNR QYSSTLKFKE QSILDRNPHQ VNGFVEDVTG KKAATVFGKW NDSLHYVSGD AFNKASASLL WKSTKPPPNV TRYNLTSFAI TLNELTPGLE
601: EKLPPTDSRL RPDQRHLEKG EYEKANEEKQ RLERRQRMSR KIQESGWRPR WFEPQGESES YKYTGGYWEA RNERRWDDCP NIFGEFTEEI ADCA

Best Arabidopsis Sequence Match ( AT4G12460.1 )
(BLAST)

001: MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH
101: KNIGIVHLKV SSYRESKSDH RKFYIFTATK TLHLRTDSRS DRAAWLQALA STRGIVPLQS INGDFSFVSP KDLSISTERL KKRLFEEGMN ESLVKECEQI
201: VDSEFCEVQE QIKLLHEERK KLLDALRQLE MANLEAEASG IHDDVYQLRN HKYSSLGRGK YSECSTSASS DDKQEFEDIS EEDEASFHDT KESFGEPDVG
301: SVLTHFKRRT KLPDPAEKER GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDQAYE YGKSGKSLLR ALNVAAFAVS GYASTEGRHC
401: KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWGDTN LRSKFWGRSI QLEPVGILTL EFDDGEIFQW SKVTTTIYNI LLGKLYCDHH
501: GIMKIRGNRQ YSCMLKFKEQ SILDRNPHQV NGFVEDVTGK KAATVFGKWN DSLYYVAGDG INKASASLLW KATKAPPNVT RYNFTSFAMT LNELIPGLEE
601: KLPPTDSRLR PDQRHLENGE YEKANEEKQR LERRQRMSRQ IQESGWRPRW FEPQGESESY KYTGGYWEAR DVKSWDDCPN IFGEFTEEVA DCA

Arabidopsis Description

ORP2BOSBP(oxysterol binding protein)-related protein 2B [Source:TAIR;Acc:AT4G12460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.