Factsheet for GSMUA_Achr6P36780_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P20840_001	Banana	cytosol	51.88	69.79
GSMUA_Achr11P...	Banana	cytosol	66.38	66.96
Solyc08g078960.2.1	Tomato	cytosol	47.97	64.02
GSMUA_Achr11P...	Banana	cytosol	65.94	63.81
VIT_02s0154g00250.t01	Wine grape	mitochondrion	45.36	63.23
PGSC0003DMT400012089	Potato	cytosol	62.03	58.87
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	60.87	58.01
AT4G22540.5	Thale cress	cytosol	60.58	57.98
AT4G12460.7	Thale cress	cytosol	57.68	57.35
CDX76366	Canola	cytosol	59.71	57.14
Bra013624.1-P	Field mustard	cytosol	60.0	56.95
CDX79161	Canola	cytosol	60.0	56.95
CDX82950	Canola	cytosol	59.71	56.67
CDY21272	Canola	nucleus	56.52	56.2
Bra000774.1-P	Field mustard	nucleus	56.52	56.2
KRH77382	Soybean	cytosol	62.46	55.97
KRH04091	Soybean	cytosol	62.17	55.86
Bra020844.1-P	Field mustard	plastid	58.26	55.6
KRH57364	Soybean	cytosol	61.59	55.19
KRH28046	Soybean	cytosol	61.16	55.09
CDY42177	Canola	cytosol	59.13	53.54
GSMUA_Achr9P02070_001	Banana	cytosol	54.06	49.6
GSMUA_Achr6P06750_001	Banana	cytosol	53.19	48.48
GSMUA_Achr2P07260_001	Banana	plastid	47.54	46.52
CDX90832	Canola	nucleus	56.81	46.17
GSMUA_Achr10P...	Banana	plastid	53.62	45.51
GSMUA_Achr1P17320_001	Banana	cytosol	19.57	29.28
GSMUA_Achr9P03900_001	Banana	cytosol	18.84	28.45
GSMUA_Achr3P21140_001	Banana	nucleus	54.78	26.73

Protein Annotations

EnsemblPlants:GSMUA_Achr6P36780_001	EnsemblPlants:GSMUA_Achr6T36780_001	EnsemblPlantsGene:GSMUA_Achr6G36780_001	Gene3D:2.30.29.30	Gene3D:2.40.160.120	InterPro:IPR001849
InterPro:IPR011993	InterPro:OSBP_sf	InterPro:Oxysterol-bd	InterPro:PH-like_dom_sf	InterPro:PH_domain	PANTHER:PTHR10972
PANTHER:PTHR10972:SF88	PFAM:PF01237	PFAM:PF15413	PFscan:PS50003	SEG:seg	SMART:SM00233
SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI00029687F5	UniProt:M0TDB8	MapMan:35.1	:

Description

oxysterol-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G36780_001]

Coordinates

chr6:-:34714024..34725435

Molecular Weight (calculated)

79771.1 Da

IEP (calculated)

6.956

GRAVY (calculated)

-0.602

Length

690 amino acids

Sequence
(BLAST)

001: MHPLCCIVLD RPGVAGDQSP DLPTNAPGGG GGPPRTNGDD VGVAGFLYKW TNYGRGWRSR WFSLRHGVLS YSKIRPRDGI SPPENGGTRP WARRIPLLVS
101: SFRESRSDDR RFYIFSRTKT LHLRTDSKKD RVAWIEALVL ASSVYSLRTL SERISFIPND ITFSTERLRD RMLVEGLRED VIKDCEQIML SEFSEYHRRL
201: QIHYEKCLNF LGTVQQHFMW HSGSSHFFSL LFSDLFMVFS LCAAHSFYFC LEYSTTESSD DVEKQETDDI SDEEESYFFD TKESFNDVSD SCAFNIRVAN
301: HETTTSKRES KTAPLEKEKS ISLWSLIKDN VGKDLTRVCL PVYFNEPLSS LQKCFEELEY SYLLDQAYEF GKRGNSLMRI LKVAAFAVSG YASSIGRSCK
401: PFNPLLGETY EADFPEKGIR FISEKVSHHP MLIACHCEGK GWKFWGDSNL TSKFWGQSIQ LDPVGVLTLE FDDGEIFQWS KVTTTIYNLI FGRLYCEHHG
501: TMNIRGNRQF SCQLKFKEKS LFDRNPRQVQ GYVEDVTGAK VASLLGKWDD LMYRNKGDDV PNKTCNITQN MCLLWERSKP PANPTRYNLT SFAITLNELT
601: SELQEKLPPT DSRLRPDQRH LENGEYEKAN AEKLRLEKRQ RMSRKLQENG WKPRWFQQEG EDSTYHYVGG YWEAREQKKW DGCPDIFGEF

Best Arabidopsis Sequence Match ( AT4G22540.1 )
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.