CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020844.1-P	Field mustard	plastid	95.28	95.02
CDX82950	Canola	cytosol	90.43	89.68
CDX79161	Canola	cytosol	90.43	89.68
AT4G22540.5	Thale cress	cytosol	89.6	89.6
CDY42177	Canola	cytosol	93.62	88.58
CDY21272	Canola	nucleus	77.12	80.12
Solyc08g078960.2.1	Tomato	cytosol	51.59	71.95
Os10t0554100-01	Rice	cytosol	35.37	70.25
PGSC0003DMT400012089	Potato	cytosol	68.52	67.95
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	67.96	67.68
KRH04091	Soybean	cytosol	71.43	67.06
KRH57364	Soybean	cytosol	71.57	67.01
KRH77382	Soybean	cytosol	71.43	66.88
VIT_02s0154g00250.t01	Wine grape	mitochondrion	45.63	66.46
KRH28046	Soybean	cytosol	70.6	66.45
GSMUA_Achr5P20840_001	Banana	cytosol	46.32	65.11
CDX90832	Canola	nucleus	76.56	65.02
GSMUA_Achr11P...	Banana	cytosol	59.08	62.28
CDX75168	Canola	endoplasmic reticulum	42.44	61.32
GSMUA_Achr6P36780_001	Banana	cytosol	57.14	59.71
CDY59861	Canola	endoplasmic reticulum	41.19	59.52
GSMUA_Achr11P...	Banana	cytosol	58.53	59.19
Os08t0154900-00	Rice	cytosol	57.84	57.28
TraesCS7B01G202100.1	Wheat	cytosol	58.11	56.55
HORVU7Hr1G071680.28	Barley	cytosol	58.25	56.53
TraesCS7D01G297200.3	Wheat	cytosol	57.98	56.49
TraesCS7A01G302000.3	Wheat	cytosol	57.98	55.73
TraesCS4B01G375900.1	Wheat	cytosol	55.62	55.69
HORVU4Hr1G088060.4	Barley	mitochondrion	49.38	55.45
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	56.45	55.37
TraesCS1A01G210800.1	Wheat	cytosol	56.73	55.35
HORVU1Hr1G053930.1	Barley	cytosol	56.59	55.28
TraesCS1D01G214100.1	Wheat	cytosol	56.73	55.12
EER91955	Sorghum	cytosol, extracellular, nucleus	57.28	54.77
TraesCS1B01G224800.1	Wheat	cytosol	56.31	54.72
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	55.34	54.58
EES13369	Sorghum	cytosol	56.31	54.57
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.92	54.32
Zm00001d048544_P003	Maize	cytosol	54.37	52.48
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	53.26	52.1
CDY34011	Canola	nucleus, plastid	56.17	51.66
CDX83144	Canola	nucleus, plastid	56.17	51.66
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	53.95	51.45
Zm00001d049556_P002	Maize	cytosol	52.29	51.22
CDX98007	Canola	cytosol	52.84	49.16
CDY19393	Canola	cytosol	52.84	48.97
CDY51776	Canola	golgi	10.96	42.47
CDX75169	Canola	plastid	31.48	39.69
CDY14648	Canola	plastid	11.79	32.95
CDY64064	Canola	plastid	11.79	32.95
CDY33036	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	18.31	28.88
CDY44693	Canola	cytosol, plastid	18.17	28.85
CDY07917	Canola	cytosol	17.75	28.83
CDY41621	Canola	cytosol, plastid	18.03	28.7
CDX73970	Canola	cytosol	17.61	28.6
CDX80271	Canola	cytosol	18.17	28.6
CDY10468	Canola	cytosol	17.48	27.81
CDY40331	Canola	cytosol, plastid	17.34	27.59
CDY22188	Canola	nucleus	6.38	26.14

Protein Annotations

EnsemblPlants:CDX76366	EnsemblPlantsGene:GSBRNA2T00126753001	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:OSBP_sf	InterPro:Oxysterol-bd
InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	PFAM:PF01237	PFAM:PF15413
PFscan:PS50003	ProteinID:CDX76366	ProteinID:CDX76366.1	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729
UniParc:UPI0004EF3BBD	MapMan:35.1	:	:	:	:

Description

BnaA08g10340D

Coordinates

chrLK031807:+:742530..747770

Molecular Weight (calculated)

82518.2 Da

IEP (calculated)

7.710

GRAVY (calculated)

-0.660

Length

721 amino acids

Sequence
(BLAST)

001: MRVKELHPLC CITLESPHGI DDNNRPPVTN FTRSRSLPAT SLAVTSVGSE SVAGILHKWT NFGKGWRSRW FLLRNGILSY SKIRRPENLN LLSSSEDVRL
101: IGDVSAGRLS RMDSSSGRRK PKKTVGIVHL KVSSFRESKS EDRKFYIFTA TKTLHLRTDS ISDRAAWLQA LASTKCIFPL RSLNGDFSFT SPMDLSISTE
201: RLKKRLHEEG INDNLVKECE QIMLSEFSEM YEQVKLLHEE RTNLFDALRQ LEVNLVWNDD NGYQLTKHGF SSLGRGKYSE CSTTASSDDK QEFEDVSEED
301: EPSFHDTKEY FNEPNVGSGS NGYTDIKRRT KLPDPAEKEK GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDRAYE HGKSGNGLLR
401: ALNVAAFAVS GYASTEGRHC KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWADTN LKSKFWGRSI QVEPVGVLTL EFDDGEVFQW
501: SKVTSTIYNI ILGKLYCDHH GVMQIRGNRQ YSCTLKFKEQ SILERNPHQV NGYVEDVSGK KAAMVFGKWD DSLYYVAGDG VSKTKVSDPA SNALLLWRRT
601: KPPPNVTRYN LTSFAITMNE LTPGLEEMLP PTDSRLRPDQ RHLENGEYEK ANLEKQRLER RQRMSRQLQE SGWRPRWFEK QGESETFKYT GGYWEARGRR
701: TWYDCPNIFG EFTEEQLADS A

Best Arabidopsis Sequence Match ( AT4G22540.1 )
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.