CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi

Predictor Summary:

nucleus 2
mitochondrion 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	secretory
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048544_P003	Maize	cytosol	84.09	82.06
HORVU4Hr1G088060.4	Barley	mitochondrion	64.61	73.36
TraesCS4B01G375900.1	Wheat	cytosol	72.02	72.92
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	72.29	72.09
EER91955	Sorghum	cytosol, extracellular, nucleus	70.64	68.3
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	68.72	67.98
GSMUA_Achr5P20840_001	Banana	cytosol	47.6	67.64
Solyc08g078960.2.1	Tomato	cytosol	45.4	64.02
GSMUA_Achr11P...	Banana	cytosol	59.53	63.45
GSMUA_Achr11P...	Banana	cytosol	59.67	61.01
VIT_02s0154g00250.t01	Wine grape	mitochondrion	40.88	60.2
PGSC0003DMT400012089	Potato	cytosol	57.61	57.77
EES13369	Sorghum	cytosol	57.2	56.05
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	55.56	55.94
AT4G22540.5	Thale cress	cytosol	55.14	55.76
AT4G12460.7	Thale cress	cytosol	52.54	55.19
CDX76366	Canola	cytosol	54.32	54.92
Bra013624.1-P	Field mustard	cytosol	54.73	54.88
CDX79161	Canola	cytosol	54.73	54.88
CDX82950	Canola	cytosol	54.6	54.75
CDY21272	Canola	nucleus	51.85	54.47
Bra000774.1-P	Field mustard	nucleus	51.85	54.47
KRH77382	Soybean	cytosol	57.34	54.29
Bra020844.1-P	Field mustard	plastid	53.36	53.8
KRH28046	Soybean	cytosol	56.1	53.39
KRH04091	Soybean	cytosol	55.69	52.86
KRH57364	Soybean	cytosol	55.42	52.47
CDY42177	Canola	cytosol	53.91	51.57
OQU91126	Sorghum	plastid	52.13	47.38
KXG23396	Sorghum	cytosol	47.87	47.29
CDX90832	Canola	nucleus	51.99	44.64
OQU92826	Sorghum	cytosol	17.42	25.76

Protein Annotations

Gene3D:2.30.29.30	Gene3D:2.40.160.120	MapMan:35.1	UniProt:A0A1B6QR91	InterPro:IPR001849	InterPro:IPR011993
EnsemblPlants:KXG40415	ProteinID:KXG40415	ProteinID:KXG40415.1	InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237
PFAM:PF15413	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972	PANTHER:PTHR10972:SF104
SMART:SM00233	EnsemblPlantsGene:SORBI_3001G541800	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI00081ABC86	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:80504987..80511095

Molecular Weight (calculated)

82932.7 Da

IEP (calculated)

7.421

GRAVY (calculated)

-0.654

Length

729 amino acids

Sequence
(BLAST)

001: MHGSKSNPKK LLLPLLVMRR ARDLHPLCCL PAADDDGGSP PPPPPSLAGL LYKWTNIGKG WRPRWFAIRG AILTYSKIPR CSSSAAAHYG QDRPVVGLVH
101: LKISSFRESK SDDRRFYIIT PTKTLQLRTD CANERVAWIE ALVSARAESS PDWGLLCNQN DASFSTERLR NRMHEEGLRE DIIKDCEQIV HSEFSQYHTQ
201: MKQRCEEYVS FIRSLPRQLE VLNADDNANM IELRSHLVKP EYSSSGQGKC SESSNTESSD DVGQQELDEL LDDDDYHFYD TRQSFSDSVT ISCLKMKGSN
301: SGKDNFLYGD KFVKSKAGMA NSECMSPFFK RRTKLPDPVE KEKGVSLWSM IKDNVGRDLT RVCLPVYFNE PLSSLQKCFE DLEYSYLLDR AYECGLKGDS
401: LMRILKVAAF AVSGYASSDG RPCKPFNPLL GETYEADYSE NGIRFFSEKV SHHPMVMACH CEGKGWKFWG DSNVKSKFWG QTIQLDPVGV LTLEFDDGET
501: FQWSKVTTTI NNLIIGRVYC NHHGTMNITG NRGYSCKLIF KQQSFLERSP RQVQGFVKDV DGSNVATLMG KWDESMYCTI ANDAPRVNCS ASGQNADATL
601: LWEKNEPSTY PTRYNLSSFA ITLNELTPEL KERLPPTDSR LRPDQRHVEN GEYGKANAEK LRLETRQRMS RKMQDSGWKP RWFRRDGSDG TFRYVGGYWE
701: AREQAKWDGC YDIFGEVSDS SPRHAAQQR

Best Arabidopsis Sequence Match ( AT4G12460.1 )
(BLAST)

001: MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH
101: KNIGIVHLKV SSYRESKSDH RKFYIFTATK TLHLRTDSRS DRAAWLQALA STRGIVPLQS INGDFSFVSP KDLSISTERL KKRLFEEGMN ESLVKECEQI
201: VDSEFCEVQE QIKLLHEERK KLLDALRQLE MANLEAEASG IHDDVYQLRN HKYSSLGRGK YSECSTSASS DDKQEFEDIS EEDEASFHDT KESFGEPDVG
301: SVLTHFKRRT KLPDPAEKER GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDQAYE YGKSGKSLLR ALNVAAFAVS GYASTEGRHC
401: KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWGDTN LRSKFWGRSI QLEPVGILTL EFDDGEIFQW SKVTTTIYNI LLGKLYCDHH
501: GIMKIRGNRQ YSCMLKFKEQ SILDRNPHQV NGFVEDVTGK KAATVFGKWN DSLYYVAGDG INKASASLLW KATKAPPNVT RYNFTSFAMT LNELIPGLEE
601: KLPPTDSRLR PDQRHLENGE YEKANEEKQR LERRQRMSRQ IQESGWRPRW FEPQGESESY KYTGGYWEAR DVKSWDDCPN IFGEFTEEVA DCA

Arabidopsis Description

ORP2BOSBP(oxysterol binding protein)-related protein 2B [Source:TAIR;Acc:AT4G12460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.