CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030609_P002	Maize	cytosol	93.9	93.27
HORVU0Hr1G010630.1	Barley	cytosol	12.47	87.62
Os12t0285600-01	Rice	cytosol	83.88	81.88
TraesCS5B01G116700.1	Wheat	cytosol	81.71	80.72
TraesCS5D01G120100.1	Wheat	cytosol	81.44	80.56
TraesCS5A01G117800.1	Wheat	cytosol	81.3	80.54
GSMUA_Achr9P02070_001	Banana	cytosol	71.82	70.48
GSMUA_Achr6P06750_001	Banana	cytosol	71.68	69.88
VIT_01s0137g00290.t01	Wine grape	cytosol	70.87	65.7
PGSC0003DMT400027973	Potato	cytosol	69.24	63.72
Solyc05g013960.2.1	Tomato	cytosol	69.11	63.67
CDY19393	Canola	cytosol	66.8	63.37
CDX98007	Canola	cytosol	66.4	63.23
KRH31371	Soybean	plastid	68.97	61.77
KRG97509	Soybean	plastid	68.43	61.36
Bra019814.1-P	Field mustard	cytosol	66.8	60.2
AT1G13170.2	Thale cress	cytosol	66.8	58.9
CDY51776	Canola	golgi	14.09	55.91
OQU91126	Sorghum	plastid	59.08	54.36
EES13369	Sorghum	cytosol	49.86	49.46
EER91955	Sorghum	cytosol, extracellular, nucleus	50.41	49.34
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.29	47.87
OQU92826	Sorghum	cytosol	17.34	25.96

Protein Annotations

EnsemblPlants:KXG23396	EnsemblPlantsGene:SORBI_3008G090000	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:OSBP_sf	InterPro:Oxysterol-bd
InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR10972	PANTHER:PTHR10972:SF67	PFAM:PF01237	PFAM:PF15413
PFscan:PS50003	ProteinID:KXG23396	ProteinID:KXG23396.1	SEG:seg	SMART:SM00233	SUPFAM:SSF144000
SUPFAM:SSF50729	UniParc:UPI00081AD881	UniProt:A0A1B6PCG6	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr8:-:33495289..33535145

Molecular Weight (calculated)

83260.4 Da

IEP (calculated)

6.691

GRAVY (calculated)

-0.520

Length

738 amino acids

Sequence
(BLAST)

001: MNPLCCIAPV SLEHAADQLH EHPTRIHAGA PPPTPAPQQD AVAGVLHKWV NYGKGWRSRW FVLEDGVLSY YKLRGSGGAG GAGAGEVAAS SAAAAARVIG
101: DGSALQQAQE VAAGAGKLWK PFGEIHLKVS SVRASKSDDK RLYIFSGTKT LHLRCETEED RNAWIDALLA AKDQFPRSLT ISDLGPADIM LSFEKLRARL
201: LQEGLSEAVV RECESIIMSE LLELHKQIKS QQQQHSILID RLRQLETEKV ELERTVVHET KERETLGYAN RRQSDFYSVL SGGSTTESDP DTASHMAEVE
301: TEEDEVTYFD TRDFLSVESL RSASCQRREL TALGFGSEYV GVSVTNTVKT TKYPFVLRRD KLPEPKEKEK HIGLWSIIRE NIGKDLSGVC LPVYFNEPLS
401: SLQKCFEDLE YSYLVDHALH WGKQGDSLMR ILHVAAFAVS GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMVVACHCDG RGWRFWGDSN
501: LKGKFWGRSI QLDPIGVLTL QFDDGETFQW SKVTTSIYNI IIGKIYCDHY GTMRINGSGQ YSCKLKFKEQ SIIDRNPHQV HGFVQDNRTG QKVAMLIGKW
601: DEAMYYVLGD PSVNPKGYDP MSEAVLLWER DKSLNQTRYN LSPFAISLNE LTPHLLNKLA PTDSRLRPDQ RHLENGEYEM ANAEKVRLEE LQRQARQLQE
701: KGWRPRWFKK DFDGSYRYVG GYWEAREKGN WDGSSGAC

Best Arabidopsis Sequence Match ( AT1G13170.1 )
(BLAST)

001: MNPLCCIAPV SIDDRTNPVV AKSSNHHLGL EAIPVSKHAS KPSFSTQASW ISQDQLERLS SEVVDDVNLD GKDASSSSNK GCFFFGNCVG AGAGVAGIMY
101: KWVNYGKGWR ARWFELEDGV LSYYKIHGPD KIVMNPSREK GVRVIGEESV RYIRKASCGS SNRLGASAVA ASRPCKPFGE IHLKVSSIRA SKSDDKRLAI
201: FTGTKTLHLR CVSKENRAAW VEAFQVAKDL FPRVASGDIL PSEDAVVSTE KLREKLLQEG VGETVVKDCE AIMLSEVSVL QNRLKVLTHK HIILLDTLRQ
301: LETEKIELEA TVVDETKEHD SCCGQGRRFS DFYSVMSEVS ASDSEADNES QDGADVESDE DDVPYFDTND ILSAEAMRSA SYRSREAEGN GSIYDKDPFF
401: SDRLQIPARI PQYPYVRRRD NLPEPKEKEK PVGLWSIIKE NIGKDLSGVC LPVYFNEPLS SLQKCFEDLE YSYLIDRALE WGKQGNELMR ILNIAAFAVS
501: GYASTEGRQC KPFNPLLGET YEADYPDKGL RFFSEKVSHH PMIVACHCEG QGWNFWGDSN IKGKFWGRSI QLDPVGVLTL KFDDGEIYQW SKVTTSIYNI
601: ILGKLYCDHY GTMRIKGGSN YSCRLKFKEQ SVIDRNPRQV HGFVQDNRTG EKVAILIGKW DEAMYYVLGD PTTKPKGYDP MTEAVLLWER DKSPTKTRYN
701: LSPFAISLNE ITPGMIDKLP PTDSRLRPDQ RHLENGEYES ANAEKLRLEQ LQRQARRLQE KGWKPRWFEK DEEGNYRYLG GYWEAREKKD WDRITDIFKK
801: QQQRNSLSSS SSSTFL

Arabidopsis Description

ORP1DOSBP(Oxysterol binding protein)-related protein 1D [Source:UniProtKB/TrEMBL;Acc:F4HP28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.