CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033669_P003	Maize	plastid	96.38	94.27
HORVU6Hr1G024620.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	8.98	93.51
Zm00001d013470_P007	Maize	plastid	93.89	92.17
HORVU2Hr1G031380.1	Barley	cytosol	37.78	89.12
TraesCS4A01G271700.1	Wheat	plastid	89.03	88.92
TraesCS4D01G039500.1	Wheat	plastid	89.9	88.14
TraesCS4B01G042300.2	Wheat	plastid	89.53	88.1
HORVU3Hr1G049220.1	Barley	cytosol	19.2	86.52
CDX75168	Canola	endoplasmic reticulum	46.76	75.15
CDY59861	Canola	endoplasmic reticulum	45.89	73.75
Bra039764.1-P	Field mustard	endoplasmic reticulum	45.76	73.55
GSMUA_Achr10P...	Banana	plastid	73.69	72.69
CDX83144	Canola	nucleus, plastid	69.58	71.17
Bra000639.1-P	Field mustard	nucleus, plastid	69.45	71.14
CDY34011	Canola	nucleus, plastid	69.2	70.79
AT2G31030.1	Thale cress	cytosol	42.39	69.53
VIT_07s0031g02980.t01	Wine grape	plastid	65.34	68.32
AT4G08180.4	Thale cress	cytosol	69.33	68.3
AT2G31020.1	Thale cress	plastid	65.46	67.48
GSMUA_Achr2P07260_001	Banana	plastid	59.23	67.38
KRH53998	Soybean	plastid	61.97	62.28
KRH63940	Soybean	nucleus, plastid	61.47	62.01
PGSC0003DMT400029169	Potato	nucleus	58.6	60.72
Solyc07g006100.2.1	Tomato	nucleus	58.98	60.56
CDX75169	Canola	plastid	43.02	60.31
PGSC0003DMT400020224	Potato	cytosol	49.0	60.18
Solyc12g010510.1.1	Tomato	cytosol, mitochondrion, plastid	48.88	59.76
KXG23396	Sorghum	cytosol	54.36	59.08
EER91955	Sorghum	cytosol, extracellular, nucleus	49.75	52.92
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.38	52.13
EES13369	Sorghum	cytosol	47.88	51.61
GSMUA_Achr3P21140_001	Banana	nucleus	75.94	43.07
OQU92826	Sorghum	cytosol	16.83	27.38

Protein Annotations

Gene3D:2.40.160.120	MapMan:35.1	UniProt:C5WNR9	ncoils:Coil	ProteinID:EER93597.1	InterPro:IPR001849
ProteinID:KXG37757.1	EnsemblPlants:OQU91126	ProteinID:OQU91126	ProteinID:OQU91126.1	InterPro:OSBP_sf	InterPro:Oxysterol-bd
PFAM:PF01237	PFAM:PF15413	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR10972	PANTHER:PTHR10972:SF100
SMART:SM00233	EnsemblPlantsGene:SORBI_3001G122000	SUPFAM:SSF144000	SUPFAM:SSF50729	unigene:Sbi.2419	UniParc:UPI0001A828B0
RefSeq:XP_002466599.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:9581904..9592247

Molecular Weight (calculated)

90017.7 Da

IEP (calculated)

7.580

GRAVY (calculated)

-0.715

Length

802 amino acids

Sequence
(BLAST)

001: MHPFCCAPLV PVSPAASAAS AGAASSAVAG APAMMPPPQP PPVPPPPARS NSAPIGERRA RAAGVSGGGG GGGTSPPEGV KLNEIVGGGI SGILYKWVNY
101: GRGWRPRWFA LHDGVLSYYK IHGPDRIILS RETERGAKVI GEDSLRRLNR TSASSPSHSN GHHHPRKPIG EIHLKVSTVR ESRSDDKRFS IFSGTKTLHL
201: RAETREDRAA WLEALRATKD MFPRMSSSEM VGPGDTAAAV AVSTERLRQR LQQEGVSEAA IADSERIVRA EFEALHKQLV LSKQKNALLV ETLRQLETEK
301: VDLENTLVDE SQRQSKEYGS ASKPRHEKYS EGSASESDDY NEPHDPAEET DDDENLYFDT RDFLSSSSFK SSGSDYQRSE AGSDDEDDYP MDGIDPSMKS
401: IGISYPYVRR RKKLPDPVEK EKGVSLWSMI KDNIGKDLTK VCLPVYFNEP LSSLQKCFED LEYSYLIDRA SEWGKRGNSL MRILSVAAFA VSGYASTDGR
501: SCKPFNPLLG ETYEADYPDK GLRFFSEKVS HHPMVVACHC EGTGWRFWAD SNLKSKFWGR SIQLDPVGAL TLEFDDGEVF QWSKVTTSIY NLILGKLYCD
601: HYGTMRIQGN REYSCKLKFK EQSIIDRNPH QVQGVVQDRN GRTVATLFGK WDESMHYVMG DCFGKGKGTE QFSEAHLLWK RSKPPKFPTR YNLTRFAITL
701: NELTPGLKEK LPPTDSRLRP DQRCLENGEY ERANAEKLRL EQRQRQARKM QESGWKPRWF AKDKDTDTYR YLGGYWESRE KSSWEGCPDI FGQVPNDLMI
801: TD

Best Arabidopsis Sequence Match ( AT4G08180.1 )
(BLAST)

001: MHPFCCVTTV SDHSPSMPPL PEPQPPLPNY AADFGSARSE PIITRSASQS YNHSGQFNNN LIHSLSFNHH QSDVTDRLGQ RVLALPAAVR EPPVDVKIND
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SEGTATESDD DNERGDAAEE EFDEEENTFF DTRDFLSSSS FKSSGSGFRT SSFSSDEDGF
401: ESEDDIDPSI KSIGCNYPRV KRRKNLPDPV EKEKSVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EDLEYSYLLD RAFEYGKRGN SLMRILNVAA
501: FAVSGYASTE GRICKPFNPL LGETYEADYP DKGLRFFSEK VSHHPMVVAC HCDGTGWKFW GDSNLRSKFW GRSIQLDPVG VLTLQFDDGE ILQWSKVTTS
601: IYNLILGKLY CDHYGTMRIE GSAEYSCKLK FKEQSIIDRN PHQVHGIVQN KSGKTVATMF GKWDESIHFV TGDCSGKGKL SEDMSGAQLL WKRSKPPGNA
701: TKYNLTRFAI TLNELTPGLK ERLPPTDSRL RPDQRYLENG EFEMANTEKL RLEQRQRQAR KMQERGWKPR WFMKEKGSES YRYKGGYWEA REDGSWVDCP
801: DIFGHIDSDQ QMIE

Arabidopsis Description

ORP1COxysterol-binding protein-related protein 1C [Source:UniProtKB/Swiss-Prot;Acc:Q8L751]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.