Factsheet for GSMUA_Achr3P21140_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G024620.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	4.81	88.31
HORVU2Hr1G031380.1	Barley	cytosol	20.08	83.53
GSMUA_Achr10P...	Banana	plastid	47.45	82.53
HORVU3Hr1G049220.1	Barley	cytosol	10.11	80.34
OQU91126	Sorghum	plastid	43.07	75.94
CDX75168	Canola	endoplasmic reticulum	26.52	75.15
TraesCS4A01G271700.1	Wheat	plastid	42.5	74.84
CDX83144	Canola	nucleus, plastid	41.16	74.23
Bra000639.1-P	Field mustard	nucleus, plastid	41.09	74.2
TraesCS4D01G039500.1	Wheat	plastid	42.86	74.08
TraesCS4B01G042300.2	Wheat	plastid	42.65	73.99
CDY34011	Canola	nucleus, plastid	41.02	73.98
CDY59861	Canola	endoplasmic reticulum	25.95	73.55
Zm00001d033669_P003	Maize	plastid	42.65	73.54
Bra039764.1-P	Field mustard	endoplasmic reticulum	25.88	73.35
Zm00001d013470_P007	Maize	plastid	41.94	72.58
GSMUA_Achr2P07260_001	Banana	plastid	36.0	72.2
AT2G31020.1	Thale cress	plastid	39.11	71.08
AT4G08180.4	Thale cress	cytosol	40.88	71.01
VIT_07s0031g02980.t01	Wine grape	plastid	38.05	70.14
AT2G31030.1	Thale cress	cytosol	24.12	69.73
CDX75169	Canola	plastid	26.8	66.26
GSMUA_Achr5P20840_001	Banana	cytosol	23.41	64.52
KRH63940	Soybean	nucleus, plastid	34.94	62.14
KRH53998	Soybean	plastid	34.65	61.4
GSMUA_Achr9P02070_001	Banana	cytosol	32.6	61.3
PGSC0003DMT400029169	Potato	nucleus	33.38	60.98
Solyc07g006100.2.1	Tomato	nucleus	33.66	60.95
Solyc12g010510.1.1	Tomato	cytosol, mitochondrion, plastid	27.93	60.21
GSMUA_Achr6P06750_001	Banana	cytosol	32.04	59.84
PGSC0003DMT400020224	Potato	cytosol	27.51	59.57
GSMUA_Achr11P...	Banana	cytosol	28.64	59.21
GSMUA_Achr11P...	Banana	cytosol	28.64	56.8
GSMUA_Achr6P36780_001	Banana	cytosol	26.73	54.78
GSMUA_Achr1P17320_001	Banana	cytosol	9.69	29.72
GSMUA_Achr9P03900_001	Banana	cytosol	9.26	28.67

Protein Annotations

Gene3D:1.10.246.120	Gene3D:1.20.1050.80	Gene3D:2.40.160.120	MapMan:22.8.3.1	ncoils:Coil	EnsemblPlantsGene:GSMUA_Achr3G21140_001
EnsemblPlants:GSMUA_Achr3P21140_001	EnsemblPlants:GSMUA_Achr3T21140_001	InterPro:IPR001849	InterPro:IPR003123	InterPro:IPR037191	UniProt:M0SGI0
InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF02204	PFAM:PF15413	InterPro:PH_domain
PFscan:PS50003	PFscan:PS51205	PANTHER:PTHR10972	PANTHER:PTHR10972:SF100	SMART:SM00167	SMART:SM00233
SUPFAM:SSF109993	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI000296EA57	InterPro:VPS9	InterPro:VPS9_dom_sf
SEG:seg	:	:	:	:	:

Description

oxysterol-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G21140_001]

Coordinates

chr3:-:22155482..22184032

Molecular Weight (calculated)

160031.0 Da

IEP (calculated)

6.653

GRAVY (calculated)

-0.589

Length

1414 amino acids

Sequence
(BLAST)

0001: MENGGGGDAF GSSTAPLTWH DFLERMRHPS ASDFVKSIKR SAPPSSVPCR GFKTCGISRF DSVKRLHCHW VDGDWEMLAF LGSCGIQFMD DNWFLNLRFY
0101: LWIQAFARLS VHHIWYDPWG LAAFFFFFLF ITSFSNKAPD PEKDSAAVQE FLANMEGAFR AHTLWAGSSE EELESSGEGL EKYIMTKLFN HVFASVQEDA
0201: NSDEELTEKM ALLQQFVRPE NLDVKKAFQN ETSWLLAQKE LQKINMYKAP RDKLICILNC CKVINNLLLN ASITSNENPP GADEFLPVLI YVTIKANPPQ
0301: LHSNLLYIQR YRRQSRLVSE AAYFFTNILS AESFIWNIDA QALSMEEAEF QKKMQSARAH LMGLSTGTEG QKPEPSQDTM ERGLGLDYPF LFASAGDLTV
0401: DDVESLLNCY KQIVLRYVAL SRGLASNESL PLPNTQTPSR LRTVENSAHV IGTEMKNEGY EEVRTKTGSS TEDLVLKMDD TAEITPAASR VGSTPRSLHR
0501: WAEEGEKGRQ RDETTKGTNQ LNRITRTWPP RSPSTSPSPS PLAILFSNSG SVDQMNPFCC SSLVPVSPAG ATAPSPSPAA RHPLAQMPLP APPPPPPPRS
0601: SAAASVAPVQ SRDPSPLHRR SFNDHNGSLR WPSTPTSAST SQQHGHHHRS ATLPSDLSAS LRSSSHDALD HREVRLNNIV GNGIAGILHK WVNYGKGWRP
0701: RWFVLQDGVL SYYKIHGPDR IEVSRETEKG TKVIGEESVR RISRRKNGRS HLPRKPVGEV HLKVSSIRES RSDDKRFSIF TGTKRLHLRA EAREDRVAWM
0801: EALQAVKDMF PRISNSELMA PVDNVVVSTE KLQQRLHEEG VNEAAIHDCE QIMRSEFYAM QNQLVLLKQK QTLLVDTLRQ LETEKVDLEN TLVDESQRQL
0901: KEHGPVSRSR YEKYSDGSAS ESDYDNERPD AAEEETDEED NTFFDTRDFL SSSSFKSTES DFHRSEFDSD DENDYGVGSV GASDSSMKSV EPNYPNVRRR
1001: EKLPDPIEKE KGVSLWSMIK DNIGKDLTKV CLPVYFNEPL SSLQKCFEDL EYSYLIDRAY EWGKKGNGLM RILNVAAFAV SGYASTDGRT CKPFNPLLGE
1101: TYEADYPDKG LRFFSEKAGL LHCVYLEVKL VSHHPMIVAC HCEGKGWKFW ADSNLKSKFW GRSIQLDPVG VLTLEFEDGE VFQWNKVTTS IYNLILGKLY
1201: CDHYGTMRIQ GNHEYSCKLK FKEQSIIDRN PHQSVVHRFI GGCLVQGIVQ DRNGKTVATL IGKWDESMHY VYGDCSGKGK GSELLSEAHL LWKRSKPPKC
1301: PTRYNLTRFA ITMNELTPGL KEKLPSTDSR LRPDQRCLEN GEYEMANAEK LRLEQRQRQA RKMQESGWKP QWFAKDKESD TYRYLGGYWE AREDGKWDGC
1401: PDIFGQVHVD PTID

Best Arabidopsis Sequence Match ( AT4G08180.1 )
(BLAST)

001: MHPFCCVTTV SDHSPSMPPL PEPQPPLPNY AADFGSARSE PIITRSASQS YNHSGQFNNN LIHSLSFNHH QSDVTDRLGQ RVLALPAAVR EPPVDVKIND
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SEGTATESDD DNERGDAAEE EFDEEENTFF DTRDFLSSSS FKSSGSGFRT SSFSSDEDGF
401: ESEDDIDPSI KSIGCNYPRV KRRKNLPDPV EKEKSVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EDLEYSYLLD RAFEYGKRGN SLMRILNVAA
501: FAVSGYASTE GRICKPFNPL LGETYEADYP DKGLRFFSEK VSHHPMVVAC HCDGTGWKFW GDSNLRSKFW GRSIQLDPVG VLTLQFDDGE ILQWSKVTTS
601: IYNLILGKLY CDHYGTMRIE GSAEYSCKLK FKEQSIIDRN PHQVHGIVQN KSGKTVATMF GKWDESIHFV TGDCSGKGKL SEDMSGAQLL WKRSKPPGNA
701: TKYNLTRFAI TLNELTPGLK ERLPPTDSRL RPDQRYLENG EFEMANTEKL RLEQRQRQAR KMQERGWKPR WFMKEKGSES YRYKGGYWEA REDGSWVDCP
801: DIFGHIDSDQ QMIE

Arabidopsis Description

ORP1COxysterol-binding protein-related protein 1C [Source:UniProtKB/Swiss-Prot;Acc:Q8L751]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.