Factsheet for GSMUA_Achr9P03900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P17320_001	Banana	cytosol	86.43	85.68
VIT_06s0004g04930.t01	Wine grape	cytosol	83.15	83.33
KRH10248	Soybean	endoplasmic reticulum	82.49	82.68
Zm00001d028606_P002	Maize	cytosol	82.28	81.56
Os03t0274000-01	Rice	plasma membrane	82.06	80.99
KRH29789	Soybean	endoplasmic reticulum	79.65	80.89
VIT_08s0007g00480.t01	Wine grape	cytosol	78.77	80.72
Zm00001d047812_P001	Maize	extracellular	82.06	80.47
KRH24783	Soybean	plastid	79.21	80.44
KRG99957	Soybean	cytosol, plastid	79.65	78.79
TraesCS4A01G096600.1	Wheat	cytosol	79.65	78.62
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	78.56	78.56
KRH49107	Soybean	endoplasmic reticulum	79.65	78.45
TraesCS4B01G207800.1	Wheat	cytosol	79.43	78.4
TraesCS4D01G208700.1	Wheat	golgi	79.43	78.4
CDX80271	Canola	cytosol	78.34	78.17
CDY33036	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	78.12	78.12
HORVU4Hr1G059840.1	Barley	cytosol	78.99	77.8
AT5G59420.1	Thale cress	cytosol, plastid	77.02	77.02
OQU92826	Sorghum	cytosol	81.84	75.86
Solyc10g084800.1.1	Tomato	extracellular, plastid	74.84	74.67
KRG93817	Soybean	cytosol	14.22	72.22
PGSC0003DMT400028593	Potato	cytosol, plastid	74.84	67.99
Zm00001d006081_P001	Maize	cytosol	22.76	61.54
Zm00001d037837_P002	Maize	endoplasmic reticulum, extracellular	41.14	61.04
Zm00001d034225_P002	Maize	endoplasmic reticulum, extracellular	44.2	56.74
Zm00001d012754_P001	Maize	cytosol	38.07	55.24
Zm00001d052202_P001	Maize	cytosol	42.67	48.39
Zm00001d040358_P001	Maize	cytosol	43.76	39.22
GSMUA_Achr5P20840_001	Banana	cytosol	26.48	23.59
GSMUA_Achr6P36780_001	Banana	cytosol	28.45	18.84
GSMUA_Achr11P...	Banana	cytosol	28.01	18.71
GSMUA_Achr11P...	Banana	cytosol	28.88	18.51
GSMUA_Achr9P02070_001	Banana	cytosol	28.01	17.02
GSMUA_Achr6P06750_001	Banana	cytosol	28.01	16.91
GSMUA_Achr2P07260_001	Banana	plastid	25.16	16.31
GSMUA_Achr10P...	Banana	plastid	28.67	16.11
GSMUA_Achr3P21140_001	Banana	nucleus	28.67	9.26

Protein Annotations

EnsemblPlants:GSMUA_Achr9P03900_001	EnsemblPlants:GSMUA_Achr9T03900_001	EnsemblPlantsGene:GSMUA_Achr9G03900_001	Gene3D:1.20.120.1290	Gene3D:2.40.160.120	InterPro:OSBP_sf
InterPro:Oxysterol-bd	InterPro:Oxysterol-bd_CS	PANTHER:PTHR10972	PANTHER:PTHR10972:SF136	PFAM:PF01237	ScanProsite:PS01013
SUPFAM:SSF144000	UniParc:UPI000295F80C	UniProt:M0TX99	MapMan:5.8.1.1	:	:

Description

Putative Oxysterol-binding protein 8 [Source:GMGC_GENE;Acc:GSMUA_Achr9G03900_001]

Coordinates

chr9:+:2643338..2651893

Molecular Weight (calculated)

52015.2 Da

IEP (calculated)

5.087

GRAVY (calculated)

-0.602

Length

457 amino acids

Sequence
(BLAST)

001: MGSKDEKPVG GGFFSAITSS VRNWGSAMHK SVNGLLGYEG LEVINPDGGT EDAEAEAQRG RWKQEDRDGY WKMMHKYIGS DVTSMVTLPV IIFEPMTMIQ
101: KMAELMEYCH LLDLADECED PYMRLVYASS WAISIYFAYQ RTWKPFNPIL GETYEMANHG GLTFIAEQVS HHPPMSAAHA ENEHFTYDIT SKLKTKFLGN
201: SLEIYPVGRT RVKLKKDGVI LDLVPPHSKV NNLIFGRTWV DSPGEMIMTN LTTGDKVVLY FQPCGWFGAG RYEVDGYVYS AEEEPKILMT GKWNESMSCQ
301: PCDQEGEPLP GTELKEVWRV AATPEKDKFQ YTYFAHKINS FDTASKKLLA SDSRLRPDRY ALEKGDMSKA GAEKSSLEER QRAEKRNREA QGHQFTPRWF
401: NMTSEVTPTP WGDIEVYEYN GRYTEHRARI DSSGSIDETD INTVEFNPWQ YGDLSAQ

Best Arabidopsis Sequence Match ( AT5G02100.1 )
(BLAST)

001: MASNDPKNGG GFFASLASSI TNFGSAMSKS VNGLMGYEGL EVINPEGSTD DAEEEAGRGR WKQEERDGYW KMMQKYIGSD VTSMVTLPVI IFEPMTMLQK
101: MAELMEYSYL LDMADKTEDP YMRMVYASSW AISVYYAYQR TWKPFNPILG ETYEMTNHNG INFIAEQVCH HPPMSAGHAE NEHFAYDCTS KLKTKFLGNS
201: IDVYPVGRTR VTLKRDGVVL DLVPPLTKVH NLIFGRTWVD SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYNS AEEPKMLMTG KWNESLSYQP
301: CDAEGEPLPG TELKEVWKVA EAPKNDKYQY THFAHKINSF DTAPKKLLSS DSRLRPDRYA LEMGDMSKSG FEKSSLEDRQ RAEKKSREEK GQKFAPKWFD
401: ETEEVTPTPW GDLEVYQFNG KYSVHRATAE NSEDTTDVKL TQFNPWQFQD LSA

Arabidopsis Description

ORP3AOxysterol-binding protein-related protein 3A [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.