Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • mitochondrion 1
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33036 Canola cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 92.78 92.78
Bra002568.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 92.56 92.56
CDX80271 Canola cytosol 91.03 90.83
VIT_06s0004g04930.t01 Wine grape cytosol 84.03 84.21
KRH10248 Soybean endoplasmic reticulum 82.93 83.11
KRH24783 Soybean plastid 81.62 82.89
KRH29789 Soybean endoplasmic reticulum 81.18 82.44
AT3G09300.1 Thale cress nucleus, plastid 78.56 78.38
AT5G02100.1 Thale cress cytosol, plastid 77.68 78.37
GSMUA_Achr9P03900_001 Banana cytosol 77.02 77.02
GSMUA_Achr1P17320_001 Banana cytosol 76.37 75.7
KRG93817 Soybean cytosol 14.88 75.56
Os03t0274000-01 Rice plasma membrane 75.49 74.51
Zm00001d028606_P002 Maize cytosol 75.05 74.4
TraesCS4A01G096600.1 Wheat cytosol 73.74 72.79
Zm00001d047812_P001 Maize extracellular 74.18 72.75
TraesCS4B01G207800.1 Wheat cytosol 73.52 72.57
TraesCS4D01G208700.1 Wheat golgi 73.52 72.57
HORVU4Hr1G059840.1 Barley cytosol 73.3 72.2
OQU92826 Sorghum cytosol 74.84 69.37
Zm00001d037837_P002 Maize endoplasmic reticulum, extracellular 38.95 57.79
Zm00001d006081_P001 Maize cytosol 19.91 53.85
Zm00001d034225_P002 Maize endoplasmic reticulum, extracellular 41.79 53.65
Zm00001d012754_P001 Maize cytosol 34.35 49.84
Zm00001d052202_P001 Maize cytosol 41.14 46.65
Zm00001d040358_P001 Maize cytosol 42.23 37.84
AT2G31030.1 Thale cress cytosol 26.48 24.74
AT4G12460.7 Thale cress cytosol 28.45 18.73
AT4G22540.5 Thale cress cytosol 28.67 18.17
AT2G31020.1 Thale cress plastid 28.45 16.71
AT4G08180.4 Thale cress cytosol 28.67 16.09
AT1G13170.2 Thale cress cytosol 28.45 15.53
AT1G77730.1 Thale cress plastid 2.63 4.53
Protein Annotations
Gene3D:1.20.120.1290Gene3D:2.40.160.120MapMan:5.8.1.1EntrezGene:836061ProteinID:AED97183.1ArrayExpress:AT5G59420
EnsemblPlantsGene:AT5G59420RefSeq:AT5G59420TAIR:AT5G59420RefSeq:AT5G59420-TAIR-GEnsemblPlants:AT5G59420.1TAIR:AT5G59420.1
EMBL:AY054473Unigene:At.24458ProteinID:BAA97478.1EMBL:BT000115GO:GO:0003674GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0006810
GO:GO:0006869GO:GO:0008150GO:GO:0008289RefSeq:NP_200750.1Symbol:ORP3CInterPro:OSBP_sf
InterPro:Oxysterol-bdInterPro:Oxysterol-bd_CSPFAM:PF01237PO:PO:0000013PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281
ScanProsite:PS01013PANTHER:PTHR10972PANTHER:PTHR10972:SF136UniProt:Q93Y40SUPFAM:SSF144000UniParc:UPI00000AC39A
SEG:seg:::::
Description
ORP3COxysterol-binding protein-related protein 3C [Source:UniProtKB/Swiss-Prot;Acc:Q93Y40]
Coordinates
chr5:+:23961567..23964874
Molecular Weight (calculated)
51968.9 Da
IEP (calculated)
4.952
GRAVY (calculated)
-0.650
Length
457 amino acids
Sequence
(BLAST)
001: MGSPKKNENK GFFAAMTSGF SMFGTAVSRS VNGVQGNEGV EVINPEGGKE DAEEEAQKGR WKDEERDSYW KMMQKYIGSD ITSMVTLPVV IFEPMTMLQK
101: MAEIMEYSHL LDQADECEDP YLRLVYASSW AISVYYAFQR TWKPFNPILG ETYEMVNHGG ISFISEQVSH HPPMSAGHAE NEHFIYDITS KLKTKLLGNS
201: VDVYPVGRTR VTLKKDGVVL DLVPPLTKIH NLIFGRTWVD SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYSA AEEPKIMMTG KWNEKMSYQP
301: CDAEGEPLPG TELKEVWHLA DVPKNDNFQY THFAHKINSF DTAPAKLLAS DSRIRPDRYS LEQGDLSKAG SEKHSLEERQ RAEKRTRETK GQKFTPRWFD
401: LTDEITPTPW GDIEVYQYNG KYNEHRDTAE SSSSASNETD LKSIEFNPWQ YGNISTE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.