Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G024620.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 13.29 | 84.42 |
| HORVU2Hr1G031380.1 | Barley | cytosol | 50.92 | 73.24 |
| HORVU3Hr1G049220.1 | Barley | cytosol | 24.54 | 67.42 |
| AT2G31020.1 | Thale cress | plastid | 83.44 | 52.44 |
| VIT_18s0001g03790.t01 | Wine grape | cytosol | 71.98 | 45.66 |
| AT4G08180.4 | Thale cress | cytosol | 74.23 | 44.59 |
| KRH64734 | Soybean | plastid | 69.73 | 43.55 |
| KRH53184 | Soybean | plastid | 69.94 | 43.35 |
| OQU91126 | Sorghum | plastid | 69.53 | 42.39 |
| PGSC0003DMT400074661 | Potato | plastid | 68.3 | 42.23 |
| KRH16599 | Soybean | plastid | 67.69 | 42.22 |
| KRH18807 | Soybean | plastid | 67.48 | 41.93 |
| TraesCS4A01G271700.1 | Wheat | plastid | 68.51 | 41.72 |
| GSMUA_Achr10P... | Banana | plastid | 69.33 | 41.7 |
| Solyc11g013190.1.1 | Tomato | nucleus, plastid | 68.92 | 41.55 |
| TraesCS4B01G042300.2 | Wheat | plastid | 68.71 | 41.23 |
| Zm00001d033669_P003 | Maize | plastid | 69.12 | 41.22 |
| TraesCS4D01G039500.1 | Wheat | plastid | 68.92 | 41.2 |
| Zm00001d013470_P007 | Maize | plastid | 68.1 | 40.76 |
| AT4G12460.7 | Thale cress | cytosol | 57.06 | 40.2 |
| AT4G22540.5 | Thale cress | cytosol | 57.87 | 39.25 |
| GSMUA_Achr2P07260_001 | Banana | plastid | 55.83 | 38.72 |
| AT1G13170.2 | Thale cress | cytosol | 59.1 | 34.53 |
| AT3G09300.1 | Thale cress | nucleus, plastid | 25.15 | 26.86 |
| AT5G02100.1 | Thale cress | cytosol, plastid | 24.54 | 26.49 |
| AT5G59420.1 | Thale cress | cytosol, plastid | 24.74 | 26.48 |
| GSMUA_Achr3P21140_001 | Banana | nucleus | 69.73 | 24.12 |
| AT1G77730.1 | Thale cress | plastid | 2.66 | 4.91 |
Protein Annotations
| Gene3D:2.40.160.120 | MapMan:35.1 | EntrezGene:817654 | ProteinID:AAM14977.1 | ProteinID:AEC08480.1 | ArrayExpress:AT2G31030 |
| EnsemblPlantsGene:AT2G31030 | RefSeq:AT2G31030 | TAIR:AT2G31030 | RefSeq:AT2G31030-TAIR-G | EnsemblPlants:AT2G31030.1 | TAIR:AT2G31030.1 |
| Unigene:At.52986 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| GO:GO:0008289 | RefSeq:NP_180660.1 | Symbol:ORP1B | InterPro:OSBP_sf | InterPro:Oxysterol-bd | PFAM:PF01237 |
| PANTHER:PTHR10972 | PANTHER:PTHR10972:SF100 | UniProt:Q8S8P9 | SUPFAM:SSF144000 | UniParc:UPI00000A0A1D | SEG:seg |
Description
ORP1BOxysterol-binding protein-related protein 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8S8P9]
Coordinates
chr2:+:13206004..13207815
Molecular Weight (calculated)
56559.0 Da
IEP (calculated)
6.778
GRAVY (calculated)
-0.742
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MEARVISCTT FGDNKVVKIA VLNHQAITKY KAGENETTVV VSDDTCPEKD VKEIKKFCEK LGYVYEGRLS EEYTQTNTGP DDDWITNGFE SDDDVDPSIK
101: TIGFNYPHVN RRNKLPDPVE KEKSVSLWSM IKDNIGKDLT KVCLPVYFNE PLSSLQKCFE DLEYSYLLDQ ASEWGKRGNN LMRILNVAAF AVSGYASTKG
201: RICKPFNPML GETYEADYPD KGLRFFSEKV SHHPMIVACH CDGTGWKFWG DSNLKSKFWG RSIQLDPIGL LTLQFDDGEI VQWSKVTTSI YNLILGKLYC
301: DHYGTMLIEG NGEYSCKLKF KKQSMMDRNP HQVQGIVEDK NGKTVAKLFG KWDESMYYVM VNQGKESESH LLWKRNKPLE NPTKYNLTRF GITLNELTPD
401: LKEMLPPTDS RLRPDQRYLE KGEFEMGNRE KLRLEQRQRQ AREKQERGWK PTWFSKEKGS ETYRYIGGYW EARDSGRWDD CPDIFGQVH
101: TIGFNYPHVN RRNKLPDPVE KEKSVSLWSM IKDNIGKDLT KVCLPVYFNE PLSSLQKCFE DLEYSYLLDQ ASEWGKRGNN LMRILNVAAF AVSGYASTKG
201: RICKPFNPML GETYEADYPD KGLRFFSEKV SHHPMIVACH CDGTGWKFWG DSNLKSKFWG RSIQLDPIGL LTLQFDDGEI VQWSKVTTSI YNLILGKLYC
301: DHYGTMLIEG NGEYSCKLKF KKQSMMDRNP HQVQGIVEDK NGKTVAKLFG KWDESMYYVM VNQGKESESH LLWKRNKPLE NPTKYNLTRF GITLNELTPD
401: LKEMLPPTDS RLRPDQRYLE KGEFEMGNRE KLRLEQRQRQ AREKQERGWK PTWFSKEKGS ETYRYIGGYW EARDSGRWDD CPDIFGQVH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.