CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
cytosol 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	golgi, nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53184	Soybean	plastid	96.93	96.2
KRH16599	Soybean	plastid	83.52	83.42
KRH18807	Soybean	plastid	83.65	83.23
VIT_18s0001g03790.t01	Wine grape	cytosol	78.29	79.51
CDX75168	Canola	endoplasmic reticulum	47.77	74.95
CDX83144	Canola	nucleus, plastid	73.82	73.72
Bra000639.1-P	Field mustard	nucleus, plastid	73.69	73.69
CDY59861	Canola	endoplasmic reticulum	46.74	73.35
CDY34011	Canola	nucleus, plastid	73.31	73.21
Bra039764.1-P	Field mustard	endoplasmic reticulum	46.62	73.15
AT2G31020.1	Thale cress	plastid	72.67	73.14
PGSC0003DMT400074661	Potato	plastid	73.56	72.82
Solyc11g013190.1.1	Tomato	nucleus, plastid	75.35	72.75
AT4G08180.4	Thale cress	cytosol	74.84	71.99
AT2G31030.1	Thale cress	cytosol	43.55	69.73
CDX75169	Canola	plastid	48.28	66.08
KRH53998	Soybean	plastid	63.09	61.9
KRH63940	Soybean	nucleus, plastid	62.84	61.89
KRH31371	Soybean	plastid	59.26	56.31
KRG97509	Soybean	plastid	58.75	55.89
KRH28046	Soybean	cytosol	53.64	54.83
KRH57364	Soybean	cytosol	53.77	54.68
KRH04091	Soybean	cytosol	53.51	54.56
KRH77382	Soybean	cytosol	53.26	54.16
KRG93817	Soybean	cytosol	4.85	42.22
KRG99957	Soybean	cytosol, plastid	18.01	30.52
KRH29789	Soybean	endoplasmic reticulum	17.24	30.0
KRH24783	Soybean	plastid	17.24	30.0
KRH10248	Soybean	endoplasmic reticulum	17.37	29.82
KRH49107	Soybean	endoplasmic reticulum	17.62	29.74

Protein Annotations

Gene3D:1.20.120.1290	EntrezGene:100818933	Gene3D:2.40.160.120	MapMan:35.1	EMBL:ACUP02002772	ncoils:Coil
EnsemblPlantsGene:GLYMA_04G253000	UniProt:I1JZA1	InterPro:IPR001849	EnsemblPlants:KRH64734	ProteinID:KRH64734	ProteinID:KRH64734.1
InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237	PFAM:PF15413	InterPro:PH_domain	PFscan:PS50003
PANTHER:PTHR10972	PANTHER:PTHR10972:SF100	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI000233A3A9
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:51963911..51970080

Molecular Weight (calculated)

89616.9 Da

IEP (calculated)

6.302

GRAVY (calculated)

-0.719

Length

783 amino acids

Sequence
(BLAST)

001: MHPFCCVSAI SDQASPVKPS FADFAMPPLP AAAAASAVRS DLAPRHSHSG SQREQPVVDV KINDLVGNGI SGILYKWVNY GKGWRPRWFV LQDGVLSYYK
101: IHGPDKIVVN QETEKGSMVI GEESMRRITR NRNSYHPQHI RKPFGEIHLQ VSTIRESKSD EKRFSVFTGT KRLHLRAETR EDRVAWTEAL QAVKDMFPRM
201: SNSELMAPVD NVTVSTEKLR VRLMEEGVSE AAIQDSEQII RTEFAALQSQ LVLLKQKHSA LIDTLRQLET EKVDLEDTVV DESQRQRNDE EASSRLAQEK
301: FSEGTASESE DDNERNDAAE EETDEDDNAF FDTRDILSSS SFKSNGSDYR VSSFSSDDEG FYAFESEDDV DPSIRYVGTN YPHVKRRKKL PDPVEKEKGV
401: SLWSMIKDNI GKDLTKVCLP VYFNEPLSSL QKCFEEMEYS YLLDQAYEWG KRGNSLMRIL YVAAFAVSGY ASTEGRVCKP FNPLLGETYE AHYPDKGLHF
501: FSEKVSHHPM IVACHCEGTG WKFWGDSNLK SKFWGRSIQL DPVGTLTLEF DDGEVFQWSK VTTSIYNLIL GKLYCDHYGT MRIQGNQEHS CKLKFKEQSI
601: IDRNPHQVHG IIQDSNGKTV STLFGKWDES MHYVNGDYTG KGKGHDTLSD ARLLWKRSRA PKFPTRYNFT RFAITLNELT PGLKEKLPPT DSRLRPDQRY
701: LENGEYDMAN VEKSRLEQRQ RQARKMQESG WKPRWFAKDK ASGTYRYVGG YWEARQRGNW DSCPDIFDQI PSDHISDEGQ ITF

Best Arabidopsis Sequence Match ( AT4G08180.1 )
(BLAST)

001: MHPFCCVTTV SDHSPSMPPL PEPQPPLPNY AADFGSARSE PIITRSASQS YNHSGQFNNN LIHSLSFNHH QSDVTDRLGQ RVLALPAAVR EPPVDVKIND
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SEGTATESDD DNERGDAAEE EFDEEENTFF DTRDFLSSSS FKSSGSGFRT SSFSSDEDGF
401: ESEDDIDPSI KSIGCNYPRV KRRKNLPDPV EKEKSVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EDLEYSYLLD RAFEYGKRGN SLMRILNVAA
501: FAVSGYASTE GRICKPFNPL LGETYEADYP DKGLRFFSEK VSHHPMVVAC HCDGTGWKFW GDSNLRSKFW GRSIQLDPVG VLTLQFDDGE ILQWSKVTTS
601: IYNLILGKLY CDHYGTMRIE GSAEYSCKLK FKEQSIIDRN PHQVHGIVQN KSGKTVATMF GKWDESIHFV TGDCSGKGKL SEDMSGAQLL WKRSKPPGNA
701: TKYNLTRFAI TLNELTPGLK ERLPPTDSRL RPDQRYLENG EFEMANTEKL RLEQRQRQAR KMQERGWKPR WFMKEKGSES YRYKGGYWEA REDGSWVDCP
801: DIFGHIDSDQ QMIE

Arabidopsis Description

ORP1COxysterol-binding protein-related protein 1C [Source:UniProtKB/Swiss-Prot;Acc:Q8L751]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.