Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64734 | Soybean | plastid | 79.51 | 78.29 |
| KRH53184 | Soybean | plastid | 79.77 | 77.95 |
| CDX75168 | Canola | endoplasmic reticulum | 49.68 | 76.75 |
| KRH16599 | Soybean | plastid | 77.95 | 76.66 |
| PGSC0003DMT400074661 | Potato | plastid | 77.82 | 75.85 |
| KRH18807 | Soybean | plastid | 77.3 | 75.73 |
| Bra039764.1-P | Field mustard | endoplasmic reticulum | 48.77 | 75.35 |
| CDY59861 | Canola | endoplasmic reticulum | 48.77 | 75.35 |
| CDX83144 | Canola | nucleus, plastid | 75.88 | 74.62 |
| Bra000639.1-P | Field mustard | nucleus, plastid | 75.75 | 74.58 |
| Solyc11g013190.1.1 | Tomato | nucleus, plastid | 78.21 | 74.35 |
| CDY34011 | Canola | nucleus, plastid | 75.23 | 73.98 |
| AT2G31020.1 | Thale cress | plastid | 73.02 | 72.36 |
| VIT_07s0031g02980.t01 | Wine grape | plastid | 71.72 | 72.1 |
| AT4G08180.4 | Thale cress | cytosol | 76.01 | 71.99 |
| AT2G31030.1 | Thale cress | cytosol | 45.66 | 71.98 |
| CDX75169 | Canola | plastid | 48.9 | 65.91 |
| VIT_02s0154g00250.t01 | Wine grape | mitochondrion | 39.69 | 61.82 |
| VIT_01s0137g00290.t01 | Wine grape | cytosol | 62.0 | 60.05 |
| VIT_02s0154g00240.t01 | Wine grape | cytosol, nucleus | 51.62 | 54.97 |
| VIT_08s0007g00480.t01 | Wine grape | cytosol | 17.64 | 30.49 |
| VIT_06s0004g04930.t01 | Wine grape | cytosol | 17.77 | 30.04 |
Protein Annotations
| EntrezGene:100245477 | wikigene:100245477 | Gene3D:2.40.160.120 | MapMan:35.1 | ProteinID:CCB45517 | ProteinID:CCB45517.1 |
| ncoils:Coil | UniProt:F6H0M0 | EMBL:FN595227 | InterPro:IPR001849 | EntrezGene:LOC100245477 | wikigene:LOC100245477 |
| InterPro:OSBP_sf | InterPro:Oxysterol-bd | PFAM:PF01237 | PFAM:PF15413 | InterPro:PH_domain | PFscan:PS50003 |
| PANTHER:PTHR10972 | PANTHER:PTHR10972:SF100 | SMART:SM00233 | SUPFAM:SSF144000 | SUPFAM:SSF50729 | TIGR:TC66012 |
| UniParc:UPI000210A64D | ArrayExpress:VIT_18s0001g03790 | EnsemblPlantsGene:VIT_18s0001g03790 | EnsemblPlants:VIT_18s0001g03790.t01 | unigene:Vvi.17835 | RefSeq:XP_002284383 |
| RefSeq:XP_002284383.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr18:+:3515123..3530220
Molecular Weight (calculated)
88104.4 Da
IEP (calculated)
6.793
GRAVY (calculated)
-0.796
Length
771 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPLPPAVGG GGVRSDSGNR SNNLNHNHGN NITDHGRLTE SMSRPPSICG DQREVKINDI VGNGISGILY KWVNYGKGWR PRWFVLQDGV LSYYKIHGPD
101: KIIVNQETEK GSKVIGEESL RRINRHRNGN SQLRRNPVGE VHLKVSSVRE SKSDDKRFSI FTGTKRMHLR AETREDRAAW MDALQAVKDM FPRMSNSELM
201: APLDNVTVST EKLRQRLLEE GVSEAAIQDS EQIMRSEFAA LQNQIVLLKQ KQLLLIDTLR HLETEKVDLE NTLVDESQRQ LKEQGASSRL RQDKYSEGSG
301: SESEDDNERV DAAEEETDDD DNTFFDTRDF LSSSSFKSTG SDFRISSFSS DDDDFYAVES EDGTDPSIIS VGKNYPHVKR RNKLPDPVEK EKGVSLWSMI
401: KDNIGKDLTK VCLPVYFNEP LSSLQKCFED LEYSYLLDRA HEWGKMGNSL MRILNVAAFA VSGYASTEGR TCKPFNPLLG ETYEADYPDK GLRFFSEKVS
501: HHPMIVACHC EGTGWKFWAD SNLKSKFWGR SIQLDPIGAL TLEFDDGETF QWSKVTTSIY NLILGKLYCD HYGTMRIQGN REYSCKLKFK EQSIIDRNPH
601: QVQGIVQDRH GKTVATLFGK WDESMHYVIG DCSGKGKGND TLSESHLLWK QCRPPKFPTR YNLTRFAITL NELTPGLKEK LPPTDSRLRP DQRCLENGEY
701: EKANSEKLRL EQRQRQSRKM QERGWKPRWF VKDKGSDTYR YVGGYWEARE KGNWDSCPDI FGQISTDQIS D
101: KIIVNQETEK GSKVIGEESL RRINRHRNGN SQLRRNPVGE VHLKVSSVRE SKSDDKRFSI FTGTKRMHLR AETREDRAAW MDALQAVKDM FPRMSNSELM
201: APLDNVTVST EKLRQRLLEE GVSEAAIQDS EQIMRSEFAA LQNQIVLLKQ KQLLLIDTLR HLETEKVDLE NTLVDESQRQ LKEQGASSRL RQDKYSEGSG
301: SESEDDNERV DAAEEETDDD DNTFFDTRDF LSSSSFKSTG SDFRISSFSS DDDDFYAVES EDGTDPSIIS VGKNYPHVKR RNKLPDPVEK EKGVSLWSMI
401: KDNIGKDLTK VCLPVYFNEP LSSLQKCFED LEYSYLLDRA HEWGKMGNSL MRILNVAAFA VSGYASTEGR TCKPFNPLLG ETYEADYPDK GLRFFSEKVS
501: HHPMIVACHC EGTGWKFWAD SNLKSKFWGR SIQLDPIGAL TLEFDDGETF QWSKVTTSIY NLILGKLYCD HYGTMRIQGN REYSCKLKFK EQSIIDRNPH
601: QVQGIVQDRH GKTVATLFGK WDESMHYVIG DCSGKGKGND TLSESHLLWK QCRPPKFPTR YNLTRFAITL NELTPGLKEK LPPTDSRLRP DQRCLENGEY
701: EKANSEKLRL EQRQRQSRKM QERGWKPRWF VKDKGSDTYR YVGGYWEARE KGNWDSCPDI FGQISTDQIS D
001: MHPFCCVTTV SDHSPSMPPL PEPQPPLPNY AADFGSARSE PIITRSASQS YNHSGQFNNN LIHSLSFNHH QSDVTDRLGQ RVLALPAAVR EPPVDVKIND
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SEGTATESDD DNERGDAAEE EFDEEENTFF DTRDFLSSSS FKSSGSGFRT SSFSSDEDGF
401: ESEDDIDPSI KSIGCNYPRV KRRKNLPDPV EKEKSVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EDLEYSYLLD RAFEYGKRGN SLMRILNVAA
501: FAVSGYASTE GRICKPFNPL LGETYEADYP DKGLRFFSEK VSHHPMVVAC HCDGTGWKFW GDSNLRSKFW GRSIQLDPVG VLTLQFDDGE ILQWSKVTTS
601: IYNLILGKLY CDHYGTMRIE GSAEYSCKLK FKEQSIIDRN PHQVHGIVQN KSGKTVATMF GKWDESIHFV TGDCSGKGKL SEDMSGAQLL WKRSKPPGNA
701: TKYNLTRFAI TLNELTPGLK ERLPPTDSRL RPDQRYLENG EFEMANTEKL RLEQRQRQAR KMQERGWKPR WFMKEKGSES YRYKGGYWEA REDGSWVDCP
801: DIFGHIDSDQ QMIE
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SEGTATESDD DNERGDAAEE EFDEEENTFF DTRDFLSSSS FKSSGSGFRT SSFSSDEDGF
401: ESEDDIDPSI KSIGCNYPRV KRRKNLPDPV EKEKSVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EDLEYSYLLD RAFEYGKRGN SLMRILNVAA
501: FAVSGYASTE GRICKPFNPL LGETYEADYP DKGLRFFSEK VSHHPMVVAC HCDGTGWKFW GDSNLRSKFW GRSIQLDPVG VLTLQFDDGE ILQWSKVTTS
601: IYNLILGKLY CDHYGTMRIE GSAEYSCKLK FKEQSIIDRN PHQVHGIVQN KSGKTVATMF GKWDESIHFV TGDCSGKGKL SEDMSGAQLL WKRSKPPGNA
701: TKYNLTRFAI TLNELTPGLK ERLPPTDSRL RPDQRYLENG EFEMANTEKL RLEQRQRQAR KMQERGWKPR WFMKEKGSES YRYKGGYWEA REDGSWVDCP
801: DIFGHIDSDQ QMIE
Arabidopsis Description
ORP1COxysterol-binding protein-related protein 1C [Source:UniProtKB/Swiss-Prot;Acc:Q8L751]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.