Factsheet for Bra039764.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59861	Canola	endoplasmic reticulum	99.8	99.8
HORVU6Hr1G024620.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	13.43	87.01
HORVU2Hr1G031380.1	Barley	cytosol	51.9	76.18
HORVU3Hr1G049220.1	Barley	cytosol	26.05	73.03
Bra000639.1-P	Field mustard	nucleus, plastid	85.77	54.66
AT4G08180.4	Thale cress	cytosol	85.57	52.46
VIT_18s0001g03790.t01	Wine grape	cytosol	75.35	48.77
KRH53184	Soybean	plastid	73.95	46.77
KRH64734	Soybean	plastid	73.15	46.62
TraesCS4A01G271700.1	Wheat	plastid	73.95	45.95
OQU91126	Sorghum	plastid	73.55	45.76
KRH16599	Soybean	plastid	71.54	45.54
KRH18807	Soybean	plastid	71.74	45.49
GSMUA_Achr10P...	Banana	plastid	73.75	45.26
PGSC0003DMT400074661	Potato	plastid	71.74	45.26
TraesCS4D01G039500.1	Wheat	plastid	74.15	45.23
TraesCS4B01G042300.2	Wheat	plastid	73.75	45.15
Zm00001d033669_P003	Maize	plastid	73.35	44.63
Solyc11g013190.1.1	Tomato	nucleus, plastid	72.14	44.39
Zm00001d013470_P007	Maize	plastid	71.74	43.82
Bra000774.1-P	Field mustard	nucleus	58.92	42.36
GSMUA_Achr2P07260_001	Banana	plastid	58.32	41.28
Bra020844.1-P	Field mustard	plastid	58.92	40.66
Bra013624.1-P	Field mustard	cytosol	58.52	40.17
Bra019814.1-P	Field mustard	cytosol	60.92	37.12
Bra001317.1-P	Field mustard	cytosol	25.85	29.05
Bra029757.1-P	Field mustard	cytosol, plastid	25.65	28.19
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	24.45	26.7
Bra034064.1-P	Field mustard	cytosol, plastid	23.45	26.65
GSMUA_Achr3P21140_001	Banana	nucleus	73.35	25.88
Bra009613.1-P	Field mustard	nucleus	22.24	25.23
Bra008330.1-P	Field mustard	plastid	2.2	4.26

Protein Annotations

EnsemblPlants:Bra039764.1	EnsemblPlants:Bra039764.1-P	EnsemblPlantsGene:Bra039764	Gene3D:2.40.160.120	InterPro:OSBP_sf	InterPro:Oxysterol-bd
ncoils:Coil	PANTHER:PTHR10972	PANTHER:PTHR10972:SF100	PFAM:PF01237	SignalP:SignalP-noTM	SUPFAM:SSF144000
UniParc:UPI0002546DC8	UniProt:M4FF92	MapMan:35.1	:	:	:

Description

AT4G08180 (E=5e-237) ORP1C | ORP1C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1C); oxysterol binding / phosphoinositide binding

Coordinates

chrA01:-:8710829..8724375

Molecular Weight (calculated)

57709.3 Da

IEP (calculated)

6.062

GRAVY (calculated)

-0.681

Length

499 amino acids

Sequence
(BLAST)

001: MIVLLLSLIM AVISLVLERE LKNEPVSLVA EEHFRASWCF SNEDLENTVV DESQRHTENE GPNDLRNEKF SGFISEGTAT ESDDENERED DIDPSIKSVG
101: FNYPRVKRRK SLPDPVEKEK SVSLWSMIKD NIGKDLTKVC LPVYFNEPLS SLQECFEDLE YSYLLDRTFE WGKRGNTLMR ILNVAAFAVS GYASTEGRIC
201: KPFNPVLGET YEADYPDKGL RFFSEKVSHH PMVVACHCDG TGWKFWADSN LKSKFWGRWI QLDPVGVLTL QFDDGKILQW SKVTTSIYNL ILGKLYCDHY
301: GTMRIEGSAE YSCKLKFKEQ SIIDRNPHQV HGIVQDKSGK TMATMFGKWE ESMHYVMGDC SGKGKLSEDM SGAQLLWKWR KPPGNATKYN LTRFAVTLNE
401: LTPGMKEKLP PTDSRLRPDQ RYLENSEFEM ANTEKLRLEQ RQRQARKMQE RGWKPRWFTK EKGSEAYRYK GGYWEARERG SWDNCPDIFG HIDSDQQIE

Best Arabidopsis Sequence Match ( AT4G08180.1 )
(BLAST)

001: MHPFCCVTTV SDHSPSMPPL PEPQPPLPNY AADFGSARSE PIITRSASQS YNHSGQFNNN LIHSLSFNHH QSDVTDRLGQ RVLALPAAVR EPPVDVKIND
101: IVGNGIAGIL YKWVNYGRGW RPRWFVLQDG VLSYYKIHGP DKIFVSPETE KGSKVIGDES ARMISRHNRR GGSSSSCQLR RKPFGEVHLK VSSVRESRSD
201: DKRFSIFTGT KRLHLRAETR EDRTTWVEAL QAVKDMFPRM SNSELMAPTN NLAMSTEKIR LRLIEEGVSE LAIQDCEQIM KSEFSALQSQ LVLLKQKQWL
301: LIDTLRQLET EKVDLENTVV DESQRQADNG CSGELRHEKF SEGTATESDD DNERGDAAEE EFDEEENTFF DTRDFLSSSS FKSSGSGFRT SSFSSDEDGF
401: ESEDDIDPSI KSIGCNYPRV KRRKNLPDPV EKEKSVSLWS MIKDNIGKDL TKVCLPVYFN EPLSSLQKCF EDLEYSYLLD RAFEYGKRGN SLMRILNVAA
501: FAVSGYASTE GRICKPFNPL LGETYEADYP DKGLRFFSEK VSHHPMVVAC HCDGTGWKFW GDSNLRSKFW GRSIQLDPVG VLTLQFDDGE ILQWSKVTTS
601: IYNLILGKLY CDHYGTMRIE GSAEYSCKLK FKEQSIIDRN PHQVHGIVQN KSGKTVATMF GKWDESIHFV TGDCSGKGKL SEDMSGAQLL WKRSKPPGNA
701: TKYNLTRFAI TLNELTPGLK ERLPPTDSRL RPDQRYLENG EFEMANTEKL RLEQRQRQAR KMQERGWKPR WFMKEKGSES YRYKGGYWEA REDGSWVDCP
801: DIFGHIDSDQ QMIE

Arabidopsis Description

ORP1COxysterol-binding protein-related protein 1C [Source:UniProtKB/Swiss-Prot;Acc:Q8L751]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.