Factsheet for Bra008330.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64064	Canola	plastid	98.45	98.45
CDY14648	Canola	plastid	98.06	98.06
AT1G77730.1	Thale cress	plastid	87.21	84.91
Bra000639.1-P	Field mustard	nucleus, plastid	49.61	16.35
Bra019814.1-P	Field mustard	cytosol	41.09	12.94
Bra013624.1-P	Field mustard	cytosol	34.11	12.1
Bra020844.1-P	Field mustard	plastid	32.56	11.62
Bra000774.1-P	Field mustard	nucleus	31.01	11.53
Bra039764.1-P	Field mustard	endoplasmic reticulum	4.26	2.2
Bra034064.1-P	Field mustard	cytosol, plastid	2.33	1.37
Bra029757.1-P	Field mustard	cytosol, plastid	2.33	1.32
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	2.33	1.31
Bra009613.1-P	Field mustard	nucleus	1.55	0.91
Bra001317.1-P	Field mustard	cytosol	1.16	0.68

Protein Annotations

EnsemblPlants:Bra008330.1	EnsemblPlants:Bra008330.1-P	EnsemblPlantsGene:Bra008330	InterPro:IPR001849	InterPro:Oxysterol-bd	InterPro:PH_domain
PANTHER:PTHR10972	PANTHER:PTHR10972:SF100	PFAM:PF15413	PFscan:PS50003	SMART:SM00233	SUPFAM:SSF50729
UniParc:UPI00025462EA	UniProt:M4CVT3	MapMan:35.1	:	:	:

Description

AT1G77730 (E=8e-130) | pleckstrin homology (PH) domain-containing protein

Coordinates

chrA02:+:14737074..14741491

Molecular Weight (calculated)

29283.1 Da

IEP (calculated)

10.121

GRAVY (calculated)

-0.591

Length

258 amino acids

Sequence
(BLAST)

001: MSSPLAAKSN PTTRSISLNI PHSARPNRHQ DLRYSLSAGP RTNEDRPQSG NGVAGILYKW INYGQGWKRR WFVLQDGVLS YYRIHGPDKI SLSVEMDRRS
101: KLIGGESLRF ICRHSKRGDV HSPGKPLGQI HLKVSSIGQG ISDSKRFTVF TGTKRLHLRA ASSEDRTAWI EALHAVKETF PRMSNEELMA TTTNVSISTD
201: KLRQRLMKEE VDETIIKDCE DIMKNNFIAL HNEVMTLKQY QCHLVDTLKN VNSVPELE

Best Arabidopsis Sequence Match ( AT1G77730.1 )
(BLAST)

001: MSSPLAAKSN LTTTRSASLN IPHSTRTNHN HDLRYSLSAG PRTNEDRPAS GNGVAGILYK WVNYGQGWKR RWFVLQDGVL SYYRIHGPDK ISLSVEMDRR
101: SKLIGGESLR FICRHSKRGD VHSPGKPLGQ IHLKVSSIGQ SISDGKRFTV FTGTKSLHLR AATSEDRASW IEALKAVKET FPRMSNEELM ASTTNVSVST
201: DKLRQRLMEE EVDETIIKDC EDIMKNNFLA LHDEVMSLKR YQYHLIDSLK NVSNSPIRPS NQSFS

Arabidopsis Description

Pleckstrin homology (PH) domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CA21]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.