Factsheet for Bra009613.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003313.1-P
Bra040323.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02100.1	Bra003313.1-P	AT2G45140.1	19207211
AT5G02100.1	Bra040323.1-P	AT2G45140.1	19207211

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40331	Canola	cytosol, plastid	95.23	92.49
CDY10468	Canola	cytosol	94.77	92.05
AT5G02100.1	Thale cress	cytosol, plastid	85.91	83.44
Bra029757.1-P	Field mustard	cytosol, plastid	83.41	80.84
Bra001317.1-P	Field mustard	cytosol	79.32	78.6
Bra034064.1-P	Field mustard	cytosol, plastid	78.18	78.36
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	73.18	70.46
Bra039764.1-P	Field mustard	endoplasmic reticulum	25.23	22.24
Bra000774.1-P	Field mustard	nucleus	26.36	16.71
Bra020844.1-P	Field mustard	plastid	26.36	16.04
Bra013624.1-P	Field mustard	cytosol	26.36	15.96
Bra000639.1-P	Field mustard	nucleus, plastid	27.73	15.58
Bra019814.1-P	Field mustard	cytosol	26.82	14.41
Bra008330.1-P	Field mustard	plastid	0.91	1.55

Protein Annotations

Gene3D:2.40.160.120	MapMan:5.8.1.1	EnsemblPlantsGene:Bra009613	EnsemblPlants:Bra009613.1	EnsemblPlants:Bra009613.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0008150	GO:GO:0008289	GO:GO:0009567	GO:GO:0032934	UniProt:M4CZG6
InterPro:OSBP_sf	InterPro:Oxysterol-bd	PFAM:PF01237	PANTHER:PTHR10972	PANTHER:PTHR10972:SF136	SUPFAM:SSF144000
UniParc:UPI0002547E0A	:	:	:	:	:

Description

AT5G02100 (E=2e-227) UNE18, ORP3A | UNE18 (UNFERTILIZED EMBRYO SAC 18); oxysterol binding / sterol binding

Coordinates

chrA10:-:17437287..17439448

Molecular Weight (calculated)

50345.1 Da

IEP (calculated)

5.234

GRAVY (calculated)

-0.644

Length

440 amino acids

Sequence
(BLAST)

001: MSPNDSKNSG GFFNSLASSI TNFGSVMTKS VNGLIGYEGI EVINPDGSTE DAEEEAGRGR WKQEERDGYW KMMQKYIGSD ITSMVTLPVI IFEPMTTLQK
101: MAELMEYSHL LDMADKTQDP CMRMVYASTW AISVYYAYQR TWKPFNPILG ETYEMTNHNG INFIADHHPP MSAAHAENEH FAYDCTSKLK SKLLGNSIDF
201: YPVGRTRVTL KRDGVVLDLV PPPTKAHNLI FGRTWVDSSG EMIMTNLTTG DKAVLYFQPC GWFGSGRYEV DGYVYNSAEE PKILVTGKWN ESLSYQACDT
301: EGEPLTCTEL KKVWKVAEAP KKDKYQYTHF AHKINSFDTA PSKLLSYDSR LRPRHWRYDQ SCLEERQRAE KRTREEKGQP LFPKWFDETE EVTPTPLGDL
401: EVYQFNGKYL VHRAAADNSE INTDMESTQF NPWQFQDTSP

Best Arabidopsis Sequence Match ( AT5G02100.1 )
(BLAST)

001: MASNDPKNGG GFFASLASSI TNFGSAMSKS VNGLMGYEGL EVINPEGSTD DAEEEAGRGR WKQEERDGYW KMMQKYIGSD VTSMVTLPVI IFEPMTMLQK
101: MAELMEYSYL LDMADKTEDP YMRMVYASSW AISVYYAYQR TWKPFNPILG ETYEMTNHNG INFIAEQVCH HPPMSAGHAE NEHFAYDCTS KLKTKFLGNS
201: IDVYPVGRTR VTLKRDGVVL DLVPPLTKVH NLIFGRTWVD SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYNS AEEPKMLMTG KWNESLSYQP
301: CDAEGEPLPG TELKEVWKVA EAPKNDKYQY THFAHKINSF DTAPKKLLSS DSRLRPDRYA LEMGDMSKSG FEKSSLEDRQ RAEKKSREEK GQKFAPKWFD
401: ETEEVTPTPW GDLEVYQFNG KYSVHRATAE NSEDTTDVKL TQFNPWQFQD LSA

Arabidopsis Description

ORP3AOxysterol-binding protein-related protein 3A [Source:UniProtKB/Swiss-Prot;Acc:Q9LZM1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.