Factsheet for Bra034064.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22188	Canola	nucleus	38.04	94.89
Bra029757.1-P	Field mustard	cytosol, plastid	95.22	92.07
AT3G09300.1	Thale cress	nucleus, plastid	94.08	90.17
Bra001317.1-P	Field mustard	cytosol	90.43	89.41
Bra009613.1-P	Field mustard	nucleus	78.36	78.18
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	77.22	74.18
Bra039764.1-P	Field mustard	endoplasmic reticulum	26.65	23.45
Bra000639.1-P	Field mustard	nucleus, plastid	29.84	16.73
Bra000774.1-P	Field mustard	nucleus	26.2	16.57
Bra020844.1-P	Field mustard	plastid	26.65	16.18
Bra013624.1-P	Field mustard	cytosol	26.42	15.96
Bra019814.1-P	Field mustard	cytosol	28.47	15.26
Bra008330.1-P	Field mustard	plastid	1.37	2.33

Protein Annotations

EnsemblPlants:Bra034064.1	EnsemblPlants:Bra034064.1-P	EnsemblPlantsGene:Bra034064	Gene3D:1.20.120.1290	Gene3D:2.40.160.120	InterPro:OSBP_sf
InterPro:Oxysterol-bd	InterPro:Oxysterol-bd_CS	ncoils:Coil	PANTHER:PTHR10972	PANTHER:PTHR10972:SF136	PFAM:PF01237
ScanProsite:PS01013	SEG:seg	SUPFAM:SSF144000	UniParc:UPI0002544395	UniProt:M4EZ21	MapMan:5.8.1.1

Description

AT3G09300 (E=3e-204) ORP3B | ORP3B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3B); oxysterol binding

Coordinates

chrA01:-:27617060..27619203

Molecular Weight (calculated)

49863.3 Da

IEP (calculated)

4.721

GRAVY (calculated)

-0.726

Length

439 amino acids

Sequence
(BLAST)

001: MAPNDPKNGG GGGGSGFFAS LASSISSLGS AMTKSVNGLV GYEGLEVINP EGSTEDAAEE ANRGRWKQED RDGYWKMMQK YIGSDVTSML MEYSHLLDMA
101: DETEDPYMRM VYASSWAISV YFAFQRTWKP FNPILGETYE MANYNGVNFI SEQVSHHPPM SAGHAENEHF TYDCTSKLKT KFLGNSIDVY PVGRTRVTLK
201: RDGVVLDLVP PLTKVHNLIF GRTWVDSPGE MIMTNMTTGD KVVLYFQPCG WFGSGRYEVD GYVYNANEEP KILMTGKWNE SMSYQQCDGE GEPLPDTELK
301: EVWKLVDAPK DDKYQYTHFA HKINSFDTAP KKLLPSDSRL RPDRYALEMG DMSKSGYEKS SMEERQRAEK RTREEKGQSF TPKWFDITEE VTPTPWGDLE
401: VYQFNGKYLE HREAADKSED NTDPKSIPFN PWQFPDMST

Best Arabidopsis Sequence Match ( AT3G09300.1 )
(BLAST)

001: MAPNDPKKAV GGGGSGFFAS LASSISNLGS AMTKSVNGLV PYEGLEVINP EGSTDDAEEE ASRGRWKQED RDGYWKMMQK YIGSDVTSMV TLPVIIFEPM
101: TMLQKMAELM EYSHLLDMAD KTEDPYLRMV YASSWAISVY YAFQRTWKPF NPILGETYEM ANYNGVNFIS EQVSHHPPMS AGHAENEHFT YDCTSKLKTK
201: FLGNSIDVYP VGRTRVTLKR DGVVLDLVPP LTKVHNLIFG RTWVDSPGEM IMTNQTTGDK VVLYFQPCGW FGSGRYEVDG YVYNASEEPK ILMTGKWNES
301: MSYQPCDGEG EPLPGTELKE VWKLADVPKD DKYQYTHFAH KINSFDTAPK KLLPSDSRLR PDRYALEMGD MSKSGYEKSS MEERQRAEKR TREEKGQAFT
401: PKWFDVTEEV TATPWGDLEV YQFNGKYSEH RAAADNSEDN TDPKSIQFNP WQFQDLST

Arabidopsis Description

ORP3BORP3B [Source:UniProtKB/TrEMBL;Acc:A0A178VKM3]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.