Factsheet for Bra020844.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76366	Canola	cytosol	95.02	95.28
Bra013624.1-P	Field mustard	cytosol	88.8	88.31
AT4G22540.5	Thale cress	cytosol	87.55	87.79
Bra000774.1-P	Field mustard	nucleus	75.8	78.96
Os10t0554100-01	Rice	cytosol	35.41	70.52
Solyc08g078960.2.1	Tomato	cytosol	50.21	70.21
PGSC0003DMT400012089	Potato	cytosol	66.94	66.58
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	66.11	66.02
VIT_02s0154g00250.t01	Wine grape	mitochondrion	44.81	65.45
KRH04091	Soybean	cytosol	69.16	65.1
KRH77382	Soybean	cytosol	69.29	65.06
KRH57364	Soybean	cytosol	69.29	65.06
KRH28046	Soybean	cytosol	68.33	64.49
GSMUA_Achr5P20840_001	Banana	cytosol	44.95	63.35
GSMUA_Achr11P...	Banana	cytosol	57.12	60.38
Bra039764.1-P	Field mustard	endoplasmic reticulum	40.66	58.92
GSMUA_Achr6P36780_001	Banana	cytosol	55.6	58.26
GSMUA_Achr11P...	Banana	cytosol	56.85	57.64
Os08t0154900-00	Rice	cytosol	56.43	56.04
HORVU7Hr1G071680.28	Barley	cytosol	56.98	55.45
TraesCS7B01G202100.1	Wheat	cytosol	56.57	55.2
TraesCS7D01G297200.3	Wheat	cytosol	56.43	55.14
TraesCS7A01G302000.3	Wheat	cytosol	56.43	54.4
TraesCS4B01G375900.1	Wheat	cytosol	53.94	54.17
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	54.91	54.01
TraesCS1A01G210800.1	Wheat	cytosol	55.19	53.99
EES13369	Sorghum	cytosol	55.46	53.9
HORVU1Hr1G053930.1	Barley	cytosol	54.91	53.79
TraesCS1D01G214100.1	Wheat	cytosol	55.19	53.77
HORVU4Hr1G088060.4	Barley	mitochondrion	47.72	53.74
EER91955	Sorghum	cytosol, extracellular, nucleus	55.74	53.45
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.8	53.36
TraesCS1B01G224800.1	Wheat	cytosol	54.63	53.23
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	53.67	53.08
Zm00001d048544_P003	Maize	cytosol	53.11	51.41
Bra000639.1-P	Field mustard	nucleus, plastid	55.33	51.09
Zm00001d049556_P002	Maize	cytosol	51.45	50.54
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	51.45	50.47
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	52.28	50.0
Bra019814.1-P	Field mustard	cytosol	52.56	46.4
Bra008330.1-P	Field mustard	plastid	11.62	32.56
Bra029757.1-P	Field mustard	cytosol, plastid	17.98	28.63
Bra002568.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	17.84	28.23
Bra001317.1-P	Field mustard	cytosol	17.29	28.15
Bra034064.1-P	Field mustard	cytosol, plastid	16.18	26.65
Bra009613.1-P	Field mustard	nucleus	16.04	26.36

Protein Annotations

EnsemblPlants:Bra020844.1	EnsemblPlants:Bra020844.1-P	EnsemblPlantsGene:Bra020844	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:OSBP_sf
InterPro:Oxysterol-bd	InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	PFAM:PF01237
PFAM:PF15413	PFscan:PS50003	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI0002545E0F
UniProt:M4DWF0	MapMan:35.1	:	:	:	:

Description

AT4G12460 (E=0.0) ORP2B | ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B); oxysterol binding

Coordinates

chrA08:-:11717941..11722433

Molecular Weight (calculated)

82623.5 Da

IEP (calculated)

8.692

GRAVY (calculated)

-0.659

Length

723 amino acids

Sequence
(BLAST)

001: MRVKELHPLC CITLESPHGI DDNNRPPVTN FTRSRSLPAT SLAGGSNRRK VTSVGSESVA GILHKWTNFG KGWRSRWFLL RNGILSYSKI RRPENLNLLS
101: SSEDVRLIGD VSAGRLSRMD SSSGRRKPKK TAGIVHLKVL DLILDFQKVS SFRESKSEDR KFYIFTATKT LHLRTDSISD RAAWLRALAS TKCIFPLRSL
201: NGDFSFTSPK DLFISTERLK KRFHEEGIND NLVKECEQIM LSEFSEMHEQ VKLLHEERTN LFDALRQLET ANLEAEASGN DDNGYQLTKH AFSSLGRGKY
301: SDEPSFHDTK EYFNEPNVGS GSNGYTDIKR RTKLPDPAEK EKGVSLWSMI KDNVGKDLTR VCLPVYFNEP ISSLQKCFED LEYSYLLDRA YEHGKSGNGL
401: LRALNVAAFA VSGYASTEGR HCKPFNPLLG ETYEADFPEK GIRFFSEKVS HHPTVIACHC EGKGWKFWGD TNLKSKFWGR SIQVEPVGVL TLEFDDGEVF
501: QWSKVTSTIY NIILGKLYCD HHGVMQIRGN RQYSCTLKFK EQSILERNPH QVNGYVEDVS AKKAATVFGK WDDSLYYVAG DGVSKTKVSD PASNALLLWR
601: RTKPPPNVTR YNLTSFAITM NELTPGLEEM LPPTDSRLRP DQRHLENGEY EKANLEKQRL ERRQRMSRQL QESGWRPRWF EKQGESETFK YTGGYWEARG
701: RRTWYDCPDI FGEFTEEQLA DSA

Best Arabidopsis Sequence Match ( AT4G22540.1 )
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.