Factsheet for VIT_02s0154g00250.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 5
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0554100-01	Rice	cytosol	53.13	72.45
Solyc08g078960.2.1	Tomato	cytosol	68.28	65.38
GSMUA_Achr5P20840_001	Banana	cytosol	62.83	60.62
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	78.18	53.45
PGSC0003DMT400012089	Potato	cytosol	70.91	48.28
CDY21272	Canola	nucleus	65.66	46.83
Bra000774.1-P	Field mustard	nucleus	65.45	46.69
AT4G22540.5	Thale cress	cytosol	67.68	46.46
AT4G12460.7	Thale cress	cytosol	65.05	46.4
KRH77382	Soybean	cytosol	72.12	46.36
KRH28046	Soybean	cytosol	71.31	46.08
CDX82950	Canola	cytosol	67.68	46.08
CDX79161	Canola	cytosol	67.68	46.08
Bra013624.1-P	Field mustard	cytosol	67.68	46.08
GSMUA_Achr11P...	Banana	cytosol	63.64	46.05
KRH04091	Soybean	cytosol	71.31	45.96
HORVU4Hr1G088060.4	Barley	mitochondrion	59.39	45.79
CDX76366	Canola	cytosol	66.46	45.63
GSMUA_Achr6P36780_001	Banana	cytosol	63.23	45.36
KRH57364	Soybean	cytosol	70.51	45.32
Bra020844.1-P	Field mustard	plastid	65.45	44.81
GSMUA_Achr11P...	Banana	cytosol	64.04	44.46
TraesCS7B01G202100.1	Wheat	cytosol	64.24	42.91
TraesCS7D01G297200.3	Wheat	cytosol	63.84	42.7
CDY42177	Canola	cytosol	65.25	42.39
HORVU7Hr1G071680.28	Barley	cytosol	63.43	42.26
Os08t0154900-00	Rice	cytosol	62.02	42.17
TraesCS7A01G302000.3	Wheat	cytosol	63.84	42.13
TraesCS4B01G375900.1	Wheat	cytosol	61.21	42.08
EES13369	Sorghum	cytosol	62.83	41.8
HORVU1Hr1G053930.1	Barley	cytosol	61.41	41.19
TraesCS1A01G210800.1	Wheat	cytosol	61.21	41.0
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.2	40.88
TraesCS1D01G214100.1	Wheat	cytosol	61.21	40.84
TraesCS1B01G224800.1	Wheat	cytosol	61.21	40.84
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	60.2	40.77
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	60.0	40.41
VIT_18s0001g03790.t01	Wine grape	cytosol	61.82	39.69
EER91955	Sorghum	cytosol, extracellular, nucleus	60.2	39.52
CDX90832	Canola	nucleus	66.46	38.75
Zm00001d048544_P003	Maize	cytosol	57.58	38.15
VIT_07s0031g02980.t01	Wine grape	plastid	58.99	38.07
VIT_01s0137g00290.t01	Wine grape	cytosol	60.81	37.81
Zm00001d049556_P002	Maize	cytosol	55.35	37.23
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	55.15	37.04
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	54.95	35.98
VIT_08s0007g00480.t01	Wine grape	cytosol	24.85	27.58
VIT_06s0004g04930.t01	Wine grape	cytosol	25.25	27.41

Protein Annotations

ArrayExpress:VIT_02s0154g00250	EMBL:FN596001	EnsemblPlants:VIT_02s0154g00250.t01	EnsemblPlantsGene:VIT_02s0154g00250	Gene3D:2.40.160.120	InterPro:OSBP_sf
InterPro:Oxysterol-bd	PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	PFAM:PF01237	ProteinID:CCB56505	ProteinID:CCB56505.1
SUPFAM:SSF144000	TIGR:TC64734	unigene:Vvi.16600	UniParc:UPI000210828F	UniProt:F6HP99	MapMan:35.1

Description

No Description!

Coordinates

chr2:+:5078324..5098966

Molecular Weight (calculated)

57203.4 Da

IEP (calculated)

8.922

GRAVY (calculated)

-0.658

Length

495 amino acids

Sequence
(BLAST)

001: MFSIKSKKLG RLILTSSIKS SAAQLNHLMI LRNKSLRKCQ MRRKPLSLTL ERILLNPQSV VVVNYMDKQM KPEIQLDNAE KIHTENRFCE SRYPQIERRK
101: KLPDPVEKEK GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDRAYE YGKAGNSLLR VLHVAAFAVS GYASSEGRHC KPFNPLLGET
201: YEADFPDKGI RFFSEKVSHH PTLIACHCEG KGWKFWADSN LRTKFWGRSI QLDPVGVLTL EFDDGEVFKW SKVTTTIYNL ILGKVYCDHH GTMHIQGNHQ
301: HSCKLKFKEQ ALLDRNPHQV HGFVEDLTGE RAATLFGKWD DSMYYVLGDR TGKLKDCNGS PDASLLWKRN RPPPCLTRYN LTSFAITLNE LTSGLQEKLP
401: PTDSRLRPDQ RHLENGEYEK ANAEKLRLEK RQRMSRKLQE NGWKPKWFER EGEDGPFRYM GGYWEARDQG KWDGCPNIFG EFTEDLVNSY EGSGL

Best Arabidopsis Sequence Match ( AT4G22540.1 )
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.