CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049556_P002	Maize	cytosol	85.22	86.14
TraesCS7B01G202100.1	Wheat	cytosol	82.66	83.0
TraesCS7D01G297200.3	Wheat	cytosol	82.26	82.7
Os08t0154900-00	Rice	cytosol	80.38	82.14
HORVU7Hr1G071680.28	Barley	cytosol	81.45	81.56
TraesCS7A01G302000.3	Wheat	cytosol	81.72	81.07
GSMUA_Achr5P20840_001	Banana	cytosol	45.16	65.5
GSMUA_Achr11P...	Banana	cytosol	58.74	63.89
Solyc08g078960.2.1	Tomato	cytosol	44.09	63.44
VIT_02s0154g00250.t01	Wine grape	mitochondrion	41.8	62.83
GSMUA_Achr11P...	Banana	cytosol	59.27	61.85
Bra000774.1-P	Field mustard	nucleus	53.9	57.78
PGSC0003DMT400012089	Potato	cytosol	56.45	57.77
CDY21272	Canola	nucleus	53.76	57.64
AT4G12460.7	Thale cress	cytosol	53.49	57.35
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.05	57.2
AT4G22540.5	Thale cress	cytosol	55.38	57.14
EER91955	Sorghum	cytosol, extracellular, nucleus	57.8	57.03
Bra013624.1-P	Field mustard	cytosol	55.11	56.4
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	54.84	56.35
CDX76366	Canola	cytosol	54.57	56.31
CDX82950	Canola	cytosol	54.97	56.26
CDX79161	Canola	cytosol	54.97	56.26
Bra020844.1-P	Field mustard	plastid	53.9	55.46
KRH77382	Soybean	cytosol	56.59	54.68
KRH28046	Soybean	cytosol	55.78	54.18
KRH04091	Soybean	cytosol	55.91	54.17
KRH57364	Soybean	cytosol	55.78	53.9
CDY42177	Canola	cytosol	53.76	52.49
KXG23396	Sorghum	cytosol	49.46	49.86
OQU91126	Sorghum	plastid	51.61	47.88
CDX90832	Canola	nucleus	54.17	47.47
OQU92826	Sorghum	cytosol	16.8	25.36

Protein Annotations

EnsemblPlants:EES13369	EnsemblPlantsGene:SORBI_3007G043700	EntrezGene:8067851	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:OSBP_sf
InterPro:Oxysterol-bd	InterPro:PH_domain	PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	PFAM:PF01237	PFAM:PF15413
PFscan:PS50003	ProteinID:EES13369	ProteinID:EES13369.1	RefSeq:XP_002443874.1	SEG:seg	SMART:SM00233
SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI0001A873EA	UniProt:C5YGY3	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr7:+:4374437..4381207

Molecular Weight (calculated)

84120.3 Da

IEP (calculated)

6.948

GRAVY (calculated)

-0.681

Length

744 amino acids

Sequence
(BLAST)

001: MTQSMRGGGS GRGHGKGQYS SSSNNHHLHH TALCCLSAAP PLPGDATPTL TPEPEAAAAA AAGPAVAVEG VLHKWTNYGR GWRERWFSLR DGVLSYSKIR
101: ADAGARARAG AADGDDREVR LIGSRVGGAR RTEKPAGVVF LKVSAFRESK SDDRRFYIFS PTKTLHLKTD SKDDRVAWIE ALILARSVYS LGSLSGRVTF
201: VQSDASISTA RLRDRMHQEG LNESLIQDCE QIVLSEFSSY RKQLKRRYED YLSLFGSCRH HFEEGKDGSI TQEALTRNDF SSSRHGNFSE YSTTESDEHE
301: FEKHDGGELT FEDESTFFDS VDYFTESDNR SSTMLSSQEV VDSQTHDSTN NIVPQIRRRI RLPEPTEKEK GISLWSIIKD SVGKDLTRVC LPVYFNEPLS
401: SLQKCFEDLE YSYLLDQAYQ HGKVGDSLMR ILKVAAFAAS GYASSVARPC KPFNPLLGET YEADYPDRGV RFFAEKVSHH PMLIACHCEG KGWKFWGDSN
501: VKSKFWGQSI QVEPVGTLTL EFEDGEIFQW NKVTTTIHNL ILGKLYCSHH GTMHIKGNRQ YSCKLKFKEP SLLDRNPHIV QGFVEDNNGN KASFLIGKWD
601: ESMYCSDSDT FKVKSADQLK GASLLWEKNK PAPNPTRYNL SSFAITLNEL TPGLQEKLPP TDSRLRPDQR HLENGEYEKA NAEKLRLERR QRMSTKLQDN
701: GWKPRWFEQD TEDGTYRYKG GYWETREKGC WDGCLDIFGE FVET

Best Arabidopsis Sequence Match ( AT4G22540.1 )
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.