CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000774.1-P	Field mustard	nucleus	80.68	98.7
CDY21272	Canola	nucleus	80.57	98.56
AT4G12460.7	Thale cress	cytosol	72.67	88.9
CDX82950	Canola	cytosol	65.72	76.75
CDX79161	Canola	cytosol	65.61	76.62
CDX76366	Canola	cytosol	65.02	76.56
CDY42177	Canola	cytosol	63.96	71.26
Os10t0554100-01	Rice	cytosol	29.92	69.97
Solyc08g078960.2.1	Tomato	cytosol	41.11	67.5
VIT_02s0154g00250.t01	Wine grape	mitochondrion	38.75	66.46
KRH77382	Soybean	cytosol	58.89	64.94
KRH28046	Soybean	cytosol	57.95	64.23
GSMUA_Achr5P20840_001	Banana	cytosol	38.75	64.13
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	54.3	63.67
KRH04091	Soybean	cytosol	56.89	62.89
PGSC0003DMT400012089	Potato	cytosol	53.71	62.72
KRH57364	Soybean	cytosol	56.77	62.6
CDX75168	Canola	endoplasmic reticulum	35.69	60.72
GSMUA_Achr11P...	Banana	cytosol	47.82	59.36
CDY59861	Canola	endoplasmic reticulum	34.86	59.32
GSMUA_Achr6P36780_001	Banana	cytosol	46.17	56.81
GSMUA_Achr11P...	Banana	cytosol	47.35	56.38
Os08t0154900-00	Rice	cytosol	47.94	55.91
HORVU4Hr1G088060.4	Barley	mitochondrion	41.58	54.98
TraesCS7B01G202100.1	Wheat	cytosol	47.82	54.79
TraesCS7D01G297200.3	Wheat	cytosol	47.7	54.73
HORVU7Hr1G071680.28	Barley	cytosol	47.82	54.64
TraesCS7A01G302000.3	Wheat	cytosol	47.94	54.27
TraesCS4B01G375900.1	Wheat	cytosol	45.94	54.17
EES13369	Sorghum	cytosol	47.47	54.17
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	46.41	53.61
HORVU1Hr1G053930.1	Barley	cytosol	46.29	53.25
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	45.82	53.21
TraesCS1A01G210800.1	Wheat	cytosol	46.05	52.91
TraesCS1D01G214100.1	Wheat	cytosol	46.17	52.83
EER91955	Sorghum	cytosol, extracellular, nucleus	46.88	52.79
TraesCS1B01G224800.1	Wheat	cytosol	45.94	52.56
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.64	51.99
CDY34011	Canola	nucleus, plastid	47.7	51.66
CDX83144	Canola	nucleus, plastid	47.59	51.53
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	43.82	50.47
Zm00001d049556_P002	Maize	cytosol	43.46	50.14
Zm00001d048544_P003	Maize	cytosol	43.82	49.8
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	44.05	49.47
CDX98007	Canola	cytosol	44.52	48.77
CDY19393	Canola	cytosol	44.64	48.71
CDY51776	Canola	golgi	8.83	40.32
CDX75169	Canola	plastid	26.15	38.81
CDY14648	Canola	plastid	9.54	31.4
CDY64064	Canola	plastid	9.54	31.4
CDY33036	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	15.31	28.45
CDX80271	Canola	cytosol	15.19	28.17
CDY07917	Canola	cytosol	14.72	28.15
CDY44693	Canola	cytosol, plastid	14.96	27.97
CDX73970	Canola	cytosol	14.61	27.93
CDY41621	Canola	cytosol, plastid	14.84	27.81
CDY40331	Canola	cytosol, plastid	14.84	27.81
CDY10468	Canola	cytosol	14.72	27.59
CDY22188	Canola	nucleus	5.65	27.27

Protein Annotations

EnsemblPlants:CDX90832	EnsemblPlantsGene:GSBRNA2T00151543001	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:OSBP_sf	InterPro:Oxysterol-bd
InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	PFAM:PF01237	PFAM:PF15413
PFscan:PS50003	ProteinID:CDX90832	ProteinID:CDX90832.1	SEG:seg	SMART:SM00233	SUPFAM:SSF144000
SUPFAM:SSF50729	UniParc:UPI0004EED618	MapMan:35.1	:	:	:

Description

BnaA03g25120D

Coordinates

chrLK031864:+:755083..762195

Molecular Weight (calculated)

97244.2 Da

IEP (calculated)

7.031

GRAVY (calculated)

-0.726

Length

849 amino acids

Sequence
(BLAST)

001: MPLTRSKSLP STDAMAENGG SDRQNLSSGR SVAGILHKWT NYGKGWRSRW FLLRDGILSY SKIRRPENVN LLSPSDDVRL IGDNSTDRLS RMYSCSGRGR
101: RKHHKTIGIV HLKVSSYRES KSDNKKFYIF TANKTLHLRT DSRSDRAAWL QALASTRRIL PLQSISGDFS FVSPKDLSIS TERLKKRLRE NGINESLVKE
201: CEEIVDSEFS EVQEQIKLLH EERTKLLDAL KQLEDMFSTE LIISELHKSM PTEASGIHES VYQLPNHNYS SLRSGKYSEC STSASSDVFE DISEEDEPSF
301: HDTIECFSEP DAGSENMHFK RRTRLPDPAE KEKGVSLWSM IKDNHMNTEN PGTVSLEPCM LLRLRSLVML PLKAGTVNLS TPCWEKLMKP TFQKKEFVSS
401: LKSVYQLPNH NYSSLRSGKY SECSTSASSD VFEDISEEDE PSFHDTIECF SEPDAGSENM HFKRRTRLPD PAEKEKGVSL WSMIKDNVGK DLSRVCLPVY
501: FNEPISSLQK CFEDLEYSYL LDQAYEYGKS GNSLLRALYV AAFAVSGYAS TEGRHCKPFN PLLGETYEAD FPEKGIRFFS EKVSHHPTVI ACHCEGKGWK
601: FWGDTNLRSK FWGRSIQLEP VGVLTLEFDD GETFQWSKVT TTIYNILLGK LYCDHHGTMQ IRGNRQYSST LKFKEQSILD RNPHQVNGFV EDVTGKKAAT
701: VFGKWNDSLH YVSGDAFNKA SASLLWKSTK PPPNVTRYNL TSFAITLNEL TPGLEEKLPP TDSRLRPDQR HLEKGEYEKA NEEKQRLERR QRMSRKIQES
801: GWRPRWFEPQ GESESYKYTG GYWEARNERR WDDCPNIFGE FTEEITDCA

Best Arabidopsis Sequence Match ( AT4G12460.1 )
(BLAST)

001: MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH
101: KNIGIVHLKV SSYRESKSDH RKFYIFTATK TLHLRTDSRS DRAAWLQALA STRGIVPLQS INGDFSFVSP KDLSISTERL KKRLFEEGMN ESLVKECEQI
201: VDSEFCEVQE QIKLLHEERK KLLDALRQLE MANLEAEASG IHDDVYQLRN HKYSSLGRGK YSECSTSASS DDKQEFEDIS EEDEASFHDT KESFGEPDVG
301: SVLTHFKRRT KLPDPAEKER GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDQAYE YGKSGKSLLR ALNVAAFAVS GYASTEGRHC
401: KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWGDTN LRSKFWGRSI QLEPVGILTL EFDDGEIFQW SKVTTTIYNI LLGKLYCDHH
501: GIMKIRGNRQ YSCMLKFKEQ SILDRNPHQV NGFVEDVTGK KAATVFGKWN DSLYYVAGDG INKASASLLW KATKAPPNVT RYNFTSFAMT LNELIPGLEE
601: KLPPTDSRLR PDQRHLENGE YEKANEEKQR LERRQRMSRQ IQESGWRPRW FEPQGESESY KYTGGYWEAR DVKSWDDCPN IFGEFTEEVA DCA

Arabidopsis Description

ORP2BOSBP(oxysterol binding protein)-related protein 2B [Source:TAIR;Acc:AT4G12460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.