Factsheet for TraesCS4D01G361400.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

plasma membrane 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	91.32	92.07
TraesCS4B01G375900.1	Wheat	cytosol	89.69	91.81
HORVU4Hr1G088060.4	Barley	mitochondrion	74.22	85.2
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	67.98	68.72
TraesCS1D01G214100.1	Wheat	cytosol	67.3	66.85
Zm00001d048544_P003	Maize	cytosol	66.49	65.6
GSMUA_Achr5P20840_001	Banana	cytosol	43.01	61.79
Solyc08g078960.2.1	Tomato	cytosol	41.79	59.57
GSMUA_Achr11P...	Banana	cytosol	54.82	59.06
GSMUA_Achr11P...	Banana	cytosol	56.72	58.63
PGSC0003DMT400012089	Potato	cytosol	54.41	55.16
VIT_02s0154g00250.t01	Wine grape	mitochondrion	37.04	55.15
TraesCS7D01G297200.3	Wheat	cytosol	54.55	54.32
AT4G22540.5	Thale cress	cytosol	53.05	54.23
AT4G12460.7	Thale cress	cytosol	50.75	53.89
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	52.37	53.31
Bra000774.1-P	Field mustard	nucleus	50.2	53.31
CDY21272	Canola	nucleus	50.2	53.31
CDX76366	Canola	cytosol	52.1	53.26
CDX79161	Canola	cytosol	52.24	52.96
Bra013624.1-P	Field mustard	cytosol	52.24	52.96
CDX82950	Canola	cytosol	51.83	52.54
KRH77382	Soybean	cytosol	54.27	51.95
KRH04091	Soybean	cytosol	54.0	51.82
KRH57364	Soybean	cytosol	54.0	51.69
Bra020844.1-P	Field mustard	plastid	50.47	51.45
KRH28046	Soybean	cytosol	53.05	51.04
CDY42177	Canola	cytosol	51.42	49.74
TraesCS5D01G120100.1	Wheat	cytosol	45.05	44.5
CDX90832	Canola	nucleus	50.47	43.82
TraesCS4D01G039500.1	Wheat	plastid	47.22	42.54
TraesCS4D01G208700.1	Wheat	golgi	15.74	25.05

Protein Annotations

EnsemblPlants:TraesCS4D01G361400.2	EnsemblPlantsGene:TraesCS4D01G361400	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:OSBP_sf	InterPro:Oxysterol-bd
InterPro:PH_domain	PANTHER:PTHR10972	PANTHER:PTHR10972:SF104	PFAM:PF01237	PFAM:PF15413	PFscan:PS50003
SEG:seg	SMART:SM00233	SUPFAM:SSF144000	SUPFAM:SSF50729	MapMan:35.1	:

Description

No Description!

Coordinates

chr4D:+:508256818..508262899

Molecular Weight (calculated)

82628.4 Da

IEP (calculated)

7.455

GRAVY (calculated)

-0.639

Length

737 amino acids

Sequence
(BLAST)

001: MRMRARDLHP LCCLPVDCPG GWCADRSPSS PSPPPAPAPA AVAGLLHKWT NIGKGWRPRW FAILRGGLLA YSKIRPRAAG SPTPPPAPED GAAPRLIGPA
101: GYAAAAPEDR PIGLVHLKIS SFRESKSDDK RFYIITPTKT LQLRTNSVKD RVAWIEALVS ARSESSPNGV LLYDQNDASF STDRLRNRMH AEGLGEEVIK
201: DCEQIVHSEF SQYYTQMKQR CEEYLSFLGS LPQQLEVLNE QDTTHSIRPE CSCSGHGKCC ESSNTESSDD AGIQELDESS DEDDYNFCDT RQSFSDSAAS
301: PDLRMKHSNS SNDVQQYDHN FVESRSGKGE NECLLLPPKR RTKLPEPVEK EKGVSLWSMI KDNVGKDLTR VCLPVYFNEP ISSLQKCFED LEYSHLLDRA
401: YDYGLKGNSV MRTLCVAAFA VSGYASSDGR PCKPFNPLLG ETYEADFPEN GIRFFSEKVS HHPMVMACHC EGRGWKFWGE SNVKSKFWGQ TIQLDPVGVL
501: TLEFDDGEIF KWSKVTTTIN NLIIGRLYCH HHGTMKISGN RQHSCKLTFK QQSFLERNPR QVQGVVEDIG GTKVATLRGK WDESLYCNVT NDGVNSSAES
601: TLLWEKHEPP TNPTRYNLSS FAITLNELTP NLKEKLPPTD SRLRPDQRHL ENGEYDKANS EKLRLETRQR RHGKCRIMDG NLDGSTGTPR TERSTTPAVT
701: GRRESRGNGM AAAIYSVNCP TRKLLRFPLA WVYNSIM

Best Arabidopsis Sequence Match ( AT4G12460.1 )
(BLAST)

001: MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH
101: KNIGIVHLKV SSYRESKSDH RKFYIFTATK TLHLRTDSRS DRAAWLQALA STRGIVPLQS INGDFSFVSP KDLSISTERL KKRLFEEGMN ESLVKECEQI
201: VDSEFCEVQE QIKLLHEERK KLLDALRQLE MANLEAEASG IHDDVYQLRN HKYSSLGRGK YSECSTSASS DDKQEFEDIS EEDEASFHDT KESFGEPDVG
301: SVLTHFKRRT KLPDPAEKER GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDQAYE YGKSGKSLLR ALNVAAFAVS GYASTEGRHC
401: KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWGDTN LRSKFWGRSI QLEPVGILTL EFDDGEIFQW SKVTTTIYNI LLGKLYCDHH
501: GIMKIRGNRQ YSCMLKFKEQ SILDRNPHQV NGFVEDVTGK KAATVFGKWN DSLYYVAGDG INKASASLLW KATKAPPNVT RYNFTSFAMT LNELIPGLEE
601: KLPPTDSRLR PDQRHLENGE YEKANEEKQR LERRQRMSRQ IQESGWRPRW FEPQGESESY KYTGGYWEAR DVKSWDDCPN IFGEFTEEVA DCA

Arabidopsis Description

ORP2BOSBP(oxysterol binding protein)-related protein 2B [Source:TAIR;Acc:AT4G12460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.