Factsheet for HORVU4Hr1G088060.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G375900.1	Wheat	cytosol	91.74	81.81
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	91.9	80.71
HORVU6Hr1G024620.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	9.03	75.32
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	85.2	74.22
GSMUA_Achr5P20840_001	Banana	cytosol	52.8	66.08
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	73.36	64.61
Solyc08g078960.2.1	Tomato	cytosol	51.4	63.83
HORVU2Hr1G031380.1	Barley	cytosol	33.02	62.35
Zm00001d048544_P003	Maize	cytosol	70.87	60.91
HORVU1Hr1G053930.1	Barley	cytosol	69.63	60.57
VIT_02s0154g00250.t01	Wine grape	mitochondrion	45.79	59.39
HORVU3Hr1G049220.1	Barley	cytosol	16.2	58.43
HORVU0Hr1G010630.1	Barley	cytosol	9.5	58.1
GSMUA_Achr11P...	Banana	cytosol	62.77	56.52
GSMUA_Achr11P...	Banana	cytosol	59.5	55.85
PGSC0003DMT400012089	Potato	cytosol	59.81	52.82
AT4G12460.7	Thale cress	cytosol	55.14	51.01
HORVU7Hr1G071680.28	Barley	cytosol	58.88	50.87
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	57.01	50.55
CDY21272	Canola	nucleus	54.52	50.43
Bra000774.1-P	Field mustard	nucleus	54.52	50.43
AT4G22540.5	Thale cress	cytosol	56.39	50.21
CDX79161	Canola	cytosol	56.39	49.79
Bra013624.1-P	Field mustard	cytosol	56.39	49.79
CDX82950	Canola	cytosol	55.92	49.38
CDX76366	Canola	cytosol	55.45	49.38
KRH77382	Soybean	cytosol	59.19	49.35
KRH04091	Soybean	cytosol	58.88	49.22
KRH57364	Soybean	cytosol	58.57	48.83
KRH28046	Soybean	cytosol	57.94	48.56
Bra020844.1-P	Field mustard	plastid	53.74	47.72
CDY42177	Canola	cytosol	55.61	46.85
CDX90832	Canola	nucleus	54.98	41.58
HORVU4Hr1G059840.1	Barley	cytosol	18.69	25.86

Protein Annotations

EnsemblPlants:HORVU4Hr1G088060.4	EnsemblPlantsGene:HORVU4Hr1G088060	Gene3D:2.30.29.30	Gene3D:2.40.160.120	InterPro:IPR001849	InterPro:IPR011993
InterPro:OSBP_sf	InterPro:Oxysterol-bd	InterPro:PH-like_dom_sf	InterPro:PH_domain	PANTHER:PTHR10972	PANTHER:PTHR10972:SF104
PFAM:PF01237	PFscan:PS50003	SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI000B467C64	UniProt:A0A287Q117
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:639214025..639219029

Molecular Weight (calculated)

73597.1 Da

IEP (calculated)

6.459

GRAVY (calculated)

-0.742

Length

642 amino acids

Sequence
(BLAST)

001: FALSGLNWAL MGPWRWLFSS CWNLRRMISS FRESKSDDKR FYIITPTKTL QLRTNSVKDR VAWIEALVSA RSESSTNGGL LYDQNDASFS TDRLRNRMHA
101: EGLGEEVIKD CEQIVHSEFL QYYTQMRRRC EEYLSFLGSL PQQLEVLNEQ DTTHSIRPEC SCSGHGKCCE SSNTESSDDA GIQELDESSD EDDYNFCDTR
201: QSFSDSAATP DLRMQCSNSS DGIHKYDHKF ADSRYGKGDN EYLALPTKRR TKLPEPVEKE KGISLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL
301: EYSQLLDRAY DYGLKGNSVM RTLCVAAFAV SGYASSDGRP CKPFNPLLGE TYEADFPENG IRFFSEKVSH HPMVMACHCQ GRGWKFWGES NVKSKFWGQT
401: IQLDPVGVLT LEFDDGEIFK WSKVTTTINN LIIGRLYCHH HGTMKISGNR QHSCKLTFKQ QSFLERNPRQ VQGVVEDIGG TKVATLRGKW DESLYCSVTN
501: DGVNSSAEST LLWEKHEPPT NLTRYNLSSF AITLNELTPN LKERLPPTDS RLRPDQRHLE NGEYDKANSE KLRLETRQRM ARKMQDNGWK PRWFDRDTED
601: GPFRYTGGYW EAREQRKWDG CRDIFGELPD KKTSPAPASV GI

Best Arabidopsis Sequence Match ( AT4G12460.1 )
(BLAST)

001: MPLTRSKSLP ATENGGSDRE TLQSGRSVAG ILYKWTNYGK GWRSRWFLLR DGILSYSKIR RPENVNLLSP SDDLRLIGDI STDRLLRMKS CSGRSRRKHH
101: KNIGIVHLKV SSYRESKSDH RKFYIFTATK TLHLRTDSRS DRAAWLQALA STRGIVPLQS INGDFSFVSP KDLSISTERL KKRLFEEGMN ESLVKECEQI
201: VDSEFCEVQE QIKLLHEERK KLLDALRQLE MANLEAEASG IHDDVYQLRN HKYSSLGRGK YSECSTSASS DDKQEFEDIS EEDEASFHDT KESFGEPDVG
301: SVLTHFKRRT KLPDPAEKER GVSLWSMIKD NVGKDLTRVC LPVYFNEPIS SLQKCFEDLE YSYLLDQAYE YGKSGKSLLR ALNVAAFAVS GYASTEGRHC
401: KPFNPLLGET YEADFPEKGI RFFSEKVSHH PTVIACHCEG KGWKFWGDTN LRSKFWGRSI QLEPVGILTL EFDDGEIFQW SKVTTTIYNI LLGKLYCDHH
501: GIMKIRGNRQ YSCMLKFKEQ SILDRNPHQV NGFVEDVTGK KAATVFGKWN DSLYYVAGDG INKASASLLW KATKAPPNVT RYNFTSFAMT LNELIPGLEE
601: KLPPTDSRLR PDQRHLENGE YEKANEEKQR LERRQRMSRQ IQESGWRPRW FEPQGESESY KYTGGYWEAR DVKSWDDCPN IFGEFTEEVA DCA

Arabidopsis Description

ORP2BOSBP(oxysterol binding protein)-related protein 2B [Source:TAIR;Acc:AT4G12460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.