Factsheet for HORVU1Hr1G053930.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G210800.1	Wheat	cytosol	95.8	95.67
TraesCS1D01G214100.1	Wheat	cytosol	95.8	95.28
TraesCS1B01G224800.1	Wheat	cytosol	95.66	95.15
Os10t0554100-01	Rice	cytosol	44.04	89.53
HORVU6Hr1G024620.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	8.54	81.82
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	78.05	78.37
EER91955	Sorghum	cytosol, extracellular, nucleus	79.67	77.98
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	73.98	72.22
HORVU4Hr1G088060.4	Barley	mitochondrion	60.57	69.63
GSMUA_Achr5P20840_001	Banana	cytosol	47.15	67.84
HORVU2Hr1G031380.1	Barley	cytosol	30.49	66.18
Solyc08g078960.2.1	Tomato	cytosol	45.8	65.38
GSMUA_Achr11P...	Banana	cytosol	59.89	64.62
GSMUA_Achr11P...	Banana	cytosol	61.11	63.25
HORVU0Hr1G010630.1	Barley	cytosol	8.81	61.9
VIT_02s0154g00250.t01	Wine grape	mitochondrion	41.19	61.41
HORVU3Hr1G049220.1	Barley	cytosol	14.77	61.24
PGSC0003DMT400012089	Potato	cytosol	58.54	59.42
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	56.78	57.87
AT4G22540.5	Thale cress	cytosol	55.96	57.28
HORVU7Hr1G071680.28	Barley	cytosol	57.45	57.07
AT4G12460.7	Thale cress	cytosol	53.66	57.06
CDX76366	Canola	cytosol	55.28	56.59
KRH77382	Soybean	cytosol	58.81	56.36
CDY21272	Canola	nucleus	52.98	56.34
Bra000774.1-P	Field mustard	nucleus	52.98	56.34
CDX79161	Canola	cytosol	55.42	56.26
Bra013624.1-P	Field mustard	cytosol	55.42	56.26
CDX82950	Canola	cytosol	55.28	56.12
KRH28046	Soybean	cytosol	57.99	55.87
KRH04091	Soybean	cytosol	57.59	55.34
Bra020844.1-P	Field mustard	plastid	53.79	54.91
KRH57364	Soybean	cytosol	57.18	54.81
CDY42177	Canola	cytosol	55.01	53.28
CDX90832	Canola	nucleus	53.25	46.29
HORVU4Hr1G059840.1	Barley	cytosol	18.02	28.66

Protein Annotations

EMBL:AK362909	EnsemblPlants:HORVU1Hr1G053930.1	EnsemblPlantsGene:HORVU1Hr1G053930	Gene3D:2.30.29.30	Gene3D:2.40.160.120	InterPro:IPR001849
InterPro:IPR011993	InterPro:OSBP_sf	InterPro:Oxysterol-bd	InterPro:PH-like_dom_sf	InterPro:PH_domain	PANTHER:PTHR10972
PANTHER:PTHR10972:SF101	PFAM:PF01237	PFAM:PF15413	PFscan:PS50003	SEG:seg	SMART:SM00233
SUPFAM:SSF144000	SUPFAM:SSF50729	UniParc:UPI00020067BA	UniProt:F2DG92	MapMan:35.1	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DG92]

Coordinates

chrchr1H:-:398276256..398284271

Molecular Weight (calculated)

82953.6 Da

IEP (calculated)

7.159

GRAVY (calculated)

-0.585

Length

738 amino acids

Sequence
(BLAST)

001: MRAREMHPLC CLAADFCPGG GGAEDDEGGC SPPTPADGAA VAGVLYKWTN IGRGWRPRWF AIRGGVLAYS KIRRRVAAEE ATLEPAAGAG VRVIGGADRG
101: AGERPIGFVH LKISSFSESK SDDKRFYIIT PTKTLQLRTG CVKDRVAWIE ALVSARSEYS LGAILPSERN GGSFSTEKLR DRLHAEGVGA EIVKDCEQIV
201: HSEFSQYHVQ MKQRCESYLS FIGSLPRELE AVNSEDATIH GNPQSQLFKP DLSSSGKCSE YSNTESSDDA GKQEIGIMSD EDEFHFYDTR QSFSEGVASP
301: DLKVRYLNYE NETCKFGDSL AADKTNEYLL SSAKRRSKLP EPVEKERSVS LWSMIKDNVG KDLTRVCLPV YFNEPLSSLQ KCFEELEYSY LLDRAYECGL
401: RGNGLMRILY VAAFAVSGYA STDSRPCKPF NPLLGETYEA DYPEKGIRFF SEKVSHHPMA MACHCEGKGW KFWGDSNLKS KFWGQSIQLD PSGILTLEFD
501: DGETFQWSKV TTTINNLIIG RVYCHHHGTM NIRGNRKYSC KLMFKEQSFL ERNPRQVQGF VKDADGTKVA SLMGKWDESM YCVVSDDASK LNSHISRQSP
601: GATLLWKKNE PPADPTRYNL SSFAITLNEL TPGLKVKLPP TDSRLRPDQR HLENGEYEKA NSEKLRLETR QRMARNMQES GWKPRWFQRD TEHGTYRYVG
701: GYWEAREQTK WVGCSDIFGS FCDNPNPRVS TLYTSASV

Best Arabidopsis Sequence Match ( AT4G22540.1 )
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.