Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G202100.1 | Wheat | cytosol | 93.81 | 94.06 |
| TraesCS7D01G297200.3 | Wheat | cytosol | 93.54 | 93.92 |
| TraesCS7A01G302000.3 | Wheat | cytosol | 92.87 | 92.0 |
| Os08t0154900-00 | Rice | cytosol | 82.1 | 83.79 |
| EES13369 | Sorghum | cytosol | 81.56 | 81.45 |
| Zm00001d049556_P002 | Maize | cytosol | 74.7 | 75.41 |
| HORVU6Hr1G024620.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 7.67 | 74.03 |
| GSMUA_Achr5P20840_001 | Banana | cytosol | 45.36 | 65.69 |
| GSMUA_Achr11P... | Banana | cytosol | 60.03 | 65.2 |
| Solyc08g078960.2.1 | Tomato | cytosol | 44.68 | 64.22 |
| HORVU0Hr1G010630.1 | Barley | cytosol | 9.02 | 63.81 |
| VIT_02s0154g00250.t01 | Wine grape | mitochondrion | 42.26 | 63.43 |
| GSMUA_Achr11P... | Banana | cytosol | 60.43 | 62.97 |
| HORVU2Hr1G031380.1 | Barley | cytosol | 28.67 | 62.65 |
| PGSC0003DMT400012089 | Potato | cytosol | 57.87 | 59.15 |
| HORVU3Hr1G049220.1 | Barley | cytosol | 14.13 | 58.99 |
| HORVU4Hr1G088060.4 | Barley | mitochondrion | 50.87 | 58.88 |
| AT4G22540.5 | Thale cress | cytosol | 57.07 | 58.81 |
| VIT_02s0154g00240.t01 | Wine grape | cytosol, nucleus | 56.93 | 58.43 |
| CDX76366 | Canola | cytosol | 56.53 | 58.25 |
| Bra000774.1-P | Field mustard | nucleus | 54.37 | 58.21 |
| CDX82950 | Canola | cytosol | 56.93 | 58.18 |
| CDY21272 | Canola | nucleus | 54.24 | 58.07 |
| CDX79161 | Canola | cytosol | 56.8 | 58.05 |
| Bra013624.1-P | Field mustard | cytosol | 56.8 | 58.05 |
| AT4G12460.7 | Thale cress | cytosol | 54.1 | 57.93 |
| HORVU1Hr1G053930.1 | Barley | cytosol | 57.07 | 57.45 |
| Bra020844.1-P | Field mustard | plastid | 55.45 | 56.98 |
| KRH57364 | Soybean | cytosol | 57.87 | 55.84 |
| KRH04091 | Soybean | cytosol | 57.6 | 55.73 |
| KRH77382 | Soybean | cytosol | 57.74 | 55.71 |
| KRH28046 | Soybean | cytosol | 56.93 | 55.22 |
| CDY42177 | Canola | cytosol | 55.45 | 54.07 |
| CDX90832 | Canola | nucleus | 54.64 | 47.82 |
| HORVU4Hr1G059840.1 | Barley | cytosol | 17.5 | 28.02 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G071680.28 | EnsemblPlantsGene:HORVU7Hr1G071680 | Gene3D:2.40.160.120 | InterPro:IPR001849 | InterPro:OSBP_sf | InterPro:Oxysterol-bd |
| InterPro:PH_domain | PANTHER:PTHR10972 | PANTHER:PTHR10972:SF88 | PFAM:PF01237 | PFAM:PF15413 | PFscan:PS50003 |
| SEG:seg | SMART:SM00233 | SUPFAM:SSF144000 | SUPFAM:SSF50729 | UniParc:UPI000B481F31 | UniProt:A0A287WU24 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:397152350..397158784
Molecular Weight (calculated)
81240.3 Da
IEP (calculated)
6.948
GRAVY (calculated)
-0.620
Length
743 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXHHHHH ALCCLSSAPP QPEAPPTPAP EPAAATAAPG PGSVAVAGVL HKWTNYGRGW RERWFSLRDG VLSYSKIRTD
101: AGGGEAAAAA GRIADDGEVR LIGGASARIA GGRRPEKPVG VVCLKVSAFR ESKSDDRRFY IFSPTKTLHL KTDSKDDRVA WIEALILARS VYSLRSLSGR
201: ITFVQSDVSV STTRLRNRMR QEGLNESLVQ DCEQIMLSEF SSYRKQLKLR YEDHLSLFGS SRHHFEEGKD GNIIQGALTK NEFSSSRHGN FSEYSTTESD
301: EFEKQDGGEL TCEEDSTFFD AADYFTESNS RSSTMSGQEV VDIQIQDSNN MLPEIKRRSK LPEPTEKEKG ISLWSIIKDS VGKDLTRVCL PVYFNEPLSS
401: LQKCFEDFEY SYLLDQAYEY GKVGNGLMRI LKVAAFAISG YASSVARPCK PFNPLLGETY EADFPDRRIR FFAEKVSHHP MLIACHSEGK GWKFWGDSNL
501: KSKFWGQSIQ VDPVGVLTVE FDDGEIFKWS KVTTTINNLI LGKLYCSHHG IMHIKGNRQY SCKLKFKEPS LLDRNTHLVQ GFVEDNDGKK ASFLIGKWDE
601: SMYYSNLDTS KVKSADQLQG ASLLWEKNKP SPNPTRYNLS SFAITLNELT PELQEKLPPT DSRLRPDQRH LENGEYEKAN TEKLRLERRQ RMSTKLQDNG
701: WKARWFEQDA EDGTYHYKGG YWEARDQGRW DGCLDIFGEF SEM
101: AGGGEAAAAA GRIADDGEVR LIGGASARIA GGRRPEKPVG VVCLKVSAFR ESKSDDRRFY IFSPTKTLHL KTDSKDDRVA WIEALILARS VYSLRSLSGR
201: ITFVQSDVSV STTRLRNRMR QEGLNESLVQ DCEQIMLSEF SSYRKQLKLR YEDHLSLFGS SRHHFEEGKD GNIIQGALTK NEFSSSRHGN FSEYSTTESD
301: EFEKQDGGEL TCEEDSTFFD AADYFTESNS RSSTMSGQEV VDIQIQDSNN MLPEIKRRSK LPEPTEKEKG ISLWSIIKDS VGKDLTRVCL PVYFNEPLSS
401: LQKCFEDFEY SYLLDQAYEY GKVGNGLMRI LKVAAFAISG YASSVARPCK PFNPLLGETY EADFPDRRIR FFAEKVSHHP MLIACHSEGK GWKFWGDSNL
501: KSKFWGQSIQ VDPVGVLTVE FDDGEIFKWS KVTTTINNLI LGKLYCSHHG IMHIKGNRQY SCKLKFKEPS LLDRNTHLVQ GFVEDNDGKK ASFLIGKWDE
601: SMYYSNLDTS KVKSADQLQG ASLLWEKNKP SPNPTRYNLS SFAITLNELT PELQEKLPPT DSRLRPDQRH LENGEYEKAN TEKLRLERRQ RMSTKLQDNG
701: WKARWFEQDA EDGTYHYKGG YWEARDQGRW DGCLDIFGEF SEM
001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A
Arabidopsis Description
ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.