Factsheet for Solyc08g078960.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0554100-01	Rice	cytosol	51.84	73.83
PGSC0003DMT400012089	Potato	cytosol	98.26	69.88
GSMUA_Achr5P20840_001	Banana	cytosol	68.47	69.01
VIT_02s0154g00250.t01	Wine grape	mitochondrion	65.38	68.28
VIT_02s0154g00240.t01	Wine grape	cytosol, nucleus	72.73	51.93
KRH77382	Soybean	cytosol	76.98	51.69
AT4G22540.5	Thale cress	cytosol	71.95	51.59
CDX76366	Canola	cytosol	71.95	51.59
HORVU4Hr1G088060.4	Barley	mitochondrion	63.83	51.4
CDX82950	Canola	cytosol	72.15	51.31
KRH28046	Soybean	cytosol	76.02	51.31
KRH04091	Soybean	cytosol	76.21	51.3
AT4G12460.7	Thale cress	cytosol	68.86	51.3
CDX79161	Canola	cytosol	71.95	51.17
Bra013624.1-P	Field mustard	cytosol	71.95	51.17
KRH57364	Soybean	cytosol	75.82	50.91
CDY21272	Canola	nucleus	67.89	50.58
Bra000774.1-P	Field mustard	nucleus	67.89	50.58
GSMUA_Achr11P...	Banana	cytosol	66.54	50.29
Bra020844.1-P	Field mustard	plastid	70.21	50.21
GSMUA_Achr11P...	Banana	cytosol	68.09	49.37
CDY42177	Canola	cytosol	72.15	48.95
GSMUA_Achr6P36780_001	Banana	cytosol	64.02	47.97
TraesCS4B01G375900.1	Wheat	cytosol	64.6	46.39
HORVU1Hr1G053930.1	Barley	cytosol	65.38	45.8
Zm00001d029872_P002	Maize	cytosol, extracellular, nucleus	64.99	45.71
TraesCS1A01G210800.1	Wheat	cytosol	64.99	45.47
TraesCS5A01G537000.1	Wheat	cytosol, nucleus, plasma membrane	64.22	45.42
KXG40415	Sorghum	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.02	45.4
Os08t0154900-00	Rice	cytosol	63.83	45.33
TraesCS1D01G214100.1	Wheat	cytosol	64.99	45.28
TraesCS7D01G297200.3	Wheat	cytosol	64.8	45.27
TraesCS7B01G202100.1	Wheat	cytosol	64.8	45.21
TraesCS1B01G224800.1	Wheat	cytosol	64.6	45.01
EER91955	Sorghum	cytosol, extracellular, nucleus	65.57	44.96
HORVU7Hr1G071680.28	Barley	cytosol	64.22	44.68
TraesCS7A01G302000.3	Wheat	cytosol	64.41	44.4
EES13369	Sorghum	cytosol	63.44	44.09
Zm00001d048544_P003	Maize	cytosol	61.9	42.84
Solyc12g010510.1.1	Tomato	cytosol, mitochondrion, plastid	53.19	41.92
TraesCS4D01G361400.2	Wheat	cytosol, nucleus, plasma membrane	59.57	41.79
CDX90832	Canola	nucleus	67.5	41.11
Zm00001d047105_P007	Maize	cytosol, extracellular, nucleus	59.96	41.01
Solyc11g013190.1.1	Tomato	nucleus, plastid	63.64	40.57
Zm00001d049556_P002	Maize	cytosol	57.64	40.49
Solyc05g013960.2.1	Tomato	cytosol	60.35	38.95
Solyc07g006100.2.1	Tomato	nucleus	58.22	38.54
Solyc10g084800.1.1	Tomato	extracellular, plastid	24.18	27.29

Protein Annotations

EnsemblPlants:Solyc08g078960.2.1	EnsemblPlantsGene:Solyc08g078960.2	Gene3D:2.40.160.120	InterPro:OSBP_sf	InterPro:Oxysterol-bd	ncoils:Coil
PANTHER:PTHR10972	PANTHER:PTHR10972:SF88	PFAM:PF01237	SUPFAM:SSF144000	UniParc:UPI000276AF06	UniProt:K4CNQ5
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:62619356..62625464

Molecular Weight (calculated)

59027.0 Da

IEP (calculated)

5.161

GRAVY (calculated)

-0.705

Length

517 amino acids

Sequence
(BLAST)

001: MLSEFSEIKG QLKSLCEERS NLLDTLRQLE AANIEGEASG VHDGEFQLMK QFSSLGRGKY SEYSTTESSD DIEKQELDEA SDEEEANYLD ANECFSEHQT
101: SGGSVVGDNM KNNTIDASAQ AQVVRRTKLP DPVEKEKGVS LWAMIKDNVG KDLTRVCLPV YFNEPISSLQ KCFEDLEYSY LLDRAYEHGK SGNSLLRILN
201: VAAFAVSGYA STEGRNCKPF NPLLGETYEA DFPEKGIRFF SEKVSHHPTL IACHCEGRGW KFWADSNLKS KFWGRSIQVD PVGTLTLEFD DGEIFQWSKV
301: TTSIYNLILG KIYCDHHGTM HIRGNRQYSC KLKYKEPSII ERNPHQVHGF VEDISGKKVA TLFGKWNESM YYINGEWTSK PKDSSILSLL WTRNNPPPNL
401: TRYNLSSFAI TLNELTPGLK EMLPPTDSRL RPDQRHLENG EYDKANAEKL RLETRQRMSR KLQENGWKPR WFQREGEDGT FRYMGGYWEA RETATWDGCP
501: NIFGEIDQDL LNSFEGS

Best Arabidopsis Sequence Match ( AT4G22540.1 )
(BLAST)

001: MRVKELHPLC CITLESPHGI NSQSPEEPVT TALTRSRSLP AKSLTGGSES ETVAGILYKW TNFGKGWRSR WFLLRNGILS YSKIRRPENL NLLSPDDDVR
101: LIGDISGERL SRMDSCSGRR KQQKTVGIVH LKVSSFRESK SDDRKFYIFT ATKTLHLRTD SITDRAAWLQ ALASTKCIFP LRSLNGDFSF IPPKDLSIST
201: ERLKKRLHEE GMNENLVKEC EQIMLSEFSE MHGQVKLLHE ERTNLLDALR QLEAANLEVG ASGKHEFSSL GRGKYSECST TASSDGKQEF EDVSEEDEPS
301: FHDTKEFFNE PNIGSESNLA ISGHTDIKRR TKLPDPAEKE KGVSLWSMIK DNVGKDLTRV CLPVYFNEPI SSLQKCFEDL EYSYLLDRAY EHGKSGNGLL
401: RALNVAAFAV SGYASTEGRH CKPFNPLLGE TYEADFPEKG IRFFSEKVSH HPTVIACHCE GKGWKFWGDT NLRSKFWGRS IQVEPVGVLT LEFDDGEVFQ
501: WSKVTSTIYN IILGKLYCDH HGVMQIRGNR QYSCTLKFKE QSILERNPHQ VNGFVEDVAG QKAATIFGKW DDSLYYVAGD GINKSKVSDP ASNASLLWKR
601: TKPPPNVTRY NLTSFAITLN ELTPGLQEIL PPTDSRLRPD QRHLENGEYE KANLEKQRLE RRQRMSRQLQ ESGWRPRWFE RQGESDTFKY TGGYWEARGH
701: RNWDDCPDIF GEFTEELADA A

Arabidopsis Description

ORP2AORP2A [Source:UniProtKB/TrEMBL;Acc:A0A178UYT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.